Conserved Protein Domain Family
IcmE

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cd16431: IcmE 
DotG/IcmE is a homolog of VirB10 which forms part of core complex in Type IV secretion system
This family contains DotG/IcmE (VirB10 homolog) and a component of the type IV secretion system (T4SS), and similar proteins. The Dot/Icm system is a T4SS found in the pathogens Legionella and Coxiella and the conjugative apparatus of IncI plasmids; T4SS is employed by pathogenic bacteria to export virulence DNAs and/or proteins directly from the bacterial cytoplasm into the host cell. Similar to T4SS VirB/D components, the Legionella Dot/Icm secretion apparatus contains a critical five-protein sub-assembly that forms the membrane-spanning 'core-complex' (CC), around which all other components assemble. This transmembrane connection is mediated by protein dimer pairs consisting of two inner membrane proteins, DotF and DotG, each independently associating with DotH/DotC/DotD in the outer membrane.
Statistics
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PSSM-Id: 319757
Aligned: 76 rows
Threshold Bit Score: 99.1894
Created: 30-Mar-2016
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative
Feature 1:putative oligomer interface [polypeptide binding site]
Evidence:
  • Comment:DotG/IcmE, along with DotF, independently associating with DotH/DotC/DotD in the outer membrane, to form the 'core complex' (CC)
  • Comment:based on comparison to similar proteins

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1           ##  ##   ## ####    # ##     ### # # # # #         #    # # #  # # #  ######  
KUX39630      208 LVSAy-TLVPAVMDTAMDSDdqNSIAIAh-VPTGAQAGAKFYSGQn----RLAG---DGIRIHFtGMELNg-VQCKVDay 277  Escherichia coli
WP_048515753  313 VTPG--TIYYAILEIGVNTDe-LSYVRSiiIQEGPLKGGVLLGMP-----ERRG---EKAVIMFnKLALNg-KDYSIN-- 378  Vibrio cholerae
WP_005742301  310 VVVG--QTFYSVLQIGVNTDe-ISPIRAvmVQKGPLEGAVLTGEP-----ARTG---EKAKLSFtDMSLNg-KSYKVT-- 375  Pseudomonas a...
AMP42381      236 LARAa-SQYMATTDMALNSDv-GGKFSVtiRGGGKLNGTKLMGSF-----ERKE---EYLRMEFdKMVTRt-DTYQVD-- 302  uncultured ba...
ENA26991      246 AARAa-SMYMATTDLALNSDv-GGPVSIt-IQNGRLRGSKLLGTF-----ERKE---QWVRIDLnKMATKt-HTLPIK-- 311  Pseudomonas s...
KER97972      243 LARAg-DMYMATADLALNSDvgGSASLT--IRNGSARNFRLIGSF-----ERKE---EWIRLELnKLVTPwkTYTNVS-- 309  Pseudomonas m...
KPM98497      928 RIPAhtLFSKAQIACEIDTDy-AGDTCVe-ITEGPLAGAVLRGTYevpnlDNPVmprDKVLVSLnKMVFNr-QSIDIE-- 1002 Vibrio algino...
ETV55978      107 IERGg-AMSIATADFAVNSDv-GGPISLt-LRSGKARGRQLIGQF-----ERKD---KWLRIELnKMLSEdmDPVPVK-- 173  Pseudomonas a...
KPM92240      312 VFDAg-ELVYARTTLPIDSDi-PGPIRIr-LLTGKAEGSIAFGEM-----ELIEq-aPGVALTVtSVIRDg-KQIPVK-- 379  Vibrio algino...
ABM21044      309 LVKGg-EIRYAQTDIALNTDf-QGPVRMt-FLEGNLRGYIGMGTF-----ELNEl-gAKMKLTIdTLFDPdgQSYAVN-- 377  Marinobacter ...
Feature 1           #     ###            # #  #  # #  #                                          #
KUX39630      278 gvASDS--LRA---AVSSNVNNRWfSRIILPAVANGLGRTGQL-YADSNSQmiitdggnay-rstdtpdgkAVAGTIIGG 350  Escherichia coli
WP_048515753  379 --AVALd-LETmrsGIADNVDRHTfERYMKLMGAAFISGYADS-LAGSTTKtysdgttet--iterlpdadDQIAYAIGR 452  Vibrio cholerae
WP_005742301  376 --AIALd-PDTyrsGLADGVDNHTfERYSKLMIASFVDGYSDA-LQDSQTTtntdgssst--vnsalpnagDQVKMGIGK 449  Pseudomonas a...
AMP42381      303 --AIGLdiDSTl-nAVEGQVNRHTlYRYGWWGVGSVLGAIGKA-AEANANTstylagnngtviqdtkrdskREVKIAVGE 378  uncultured ba...
ENA26991      312 --AIGLdlDTTl-nAVQGEVDEHLlYRYGWWGVGTVLSAIGSA-AEKNADSniiitdgsv--iksmqadssRELKSALGE 385  Pseudomonas s...
KER97972      310 --AIGLd-VGTslnAVEGDVDRHImYRYGWWGFGTVLKAVGSA-AEKNANQqvvisdgna--iqstqqdssREIKMALGS 383  Pseudomonas m...
KPM98497     1003 --AVVVn-PITmsqAVSSEVDYHRmYRWGGLMAATTLDLAQGLvIGNAIAEgasseds-------gsatnaVAVQMAIAE 1072 Vibrio algino...
ETV55978      174 --AIGLd-METtmsGVEGDLDSHImYRYGWWGLGAVLSAVGKA-AENNANEqvivsdgav--vtsaqqdssRELKMALGS 247  Pseudomonas a...
KPM92240      380 --AWVLs-AETekaLIEGEVDHHYiQRFGGMFAGLFMTGFLDS-LIDTTVTtsngettts---tgaidntrDRIVYSIAK 452  Vibrio algino...
ABM21044      378 --GYVLd-PNTtlwAMASNVDYHIiYRYGGFGLGTILSAFQTL-AENRAQIsetvtpdgtrstqnrepdgkQVTWTVLGE 453  Marinobacter ...
Feature 1         #########          # # ### #   #         ##### 
KUX39630      351 MGEQAGRVLADdaarlPIKQVTVDRNqLIGIQf-------vAPVYES 390  Escherichia coli
WP_048515753  453 AGEKLVPIFERef--dRDPTVEVDSNrEIAIMl-------lNGIQIE 490  Vibrio cholerae
WP_005742301  450 MGEKFSPIFEKef--dRPPTVTVEPNkSIVIMfm-----anLDLSKP 489  Pseudomonas amygdali
AMP42381      379 LGQDMGDVFKSri--nRPITVKLNAGdSIGIFl--------LDDICQ 415  uncultured bacterium IN-11
ENA26991      386 LGSEIGSVMKEri--nRPITVSLKVNdELGVFf-------lDDVCLP 423  Pseudomonas sp. HPB0071
KER97972      384 LGNDLGSAFQDrl--dRPITVSLKVGdEVGVFf--------LDDVCR 420  Pseudomonas mendocina
KPM98497     1073 PIKETSDMYRAqm--gRKPTARMFKDdPVGVLf-------tSEVIDS 1110 Vibrio alginolyticus
ETV55978      248 LGQDLGDAFKDri--nRPITVSLKVNeQVGVYf-------lDDVCAS 285  Pseudomonas aeruginosa BWHPSA037
KPM92240      453 AAQGFLPILYDna--rRPVQVEIPKGqTMYLLfenq-vletDEIQTP 496  Vibrio alginolyticus
ABM21044      454 FGALFEETFRDni--nRPITVTLDPNeEAGVLfedtvcelnTDISKK 498  Marinobacter hydrocarbonoclasticus VT8

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