Conserved Protein Domain Family
integ_memb_HG

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TIGR03954: integ_memb_HG 
integral membrane protein
This model describes a strictly bacterial integral membrane domain of about 85 residues in length. It occurs in proteins that on rare occasions are fused to transporter domains such as the major facilitator superfamily domain. Of three invariant residues, two occur as a His-Gly dipeptide in the middle of three predicted transmembrane helices. [Unknown function, General]
Statistics
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PSSM-Id: 274878
Aligned: 89 rows
Threshold Bit Score: 60.1939
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_04027791   27 YRFMANFTGVFLLILC-AELIYKYVIaaIWdlpaPEWLWYIGAV---HGWGYVIYLLFTLDLGMKVRWPAPRFLLTLLAG 102 Tsukamurella pa...
ZP_05499028    9 LSVMALVEGSSLIALVlLAVPLKYAA--DW----PVGVKIIGPI---HGALFIWATIALVVTLSRGQLSPLRSLGVFLAS 79  Thiomonas inter...
ZP_04943058   31 LQYLSLLEATTLVVLVcVAVPLKHLA--GY----PVVVSIMGPV---HGIAFAMYVWAVVGTASSGLWSKTEVARLVLSA 101 Burkholderia ce...
WP_015748715  50 YKIAAFIVGWGLLLLC-AAMVAKYLF--DL----PQFVVIWGPI---HGALFVGYVILAFDLAYKDRWSPLGTLWVLVAG 119 Nakamurella mul...
WP_011718894  27 YRLLAYIVGTGLVILVfVGVPLNHLA--HF----PYVAKYVGTA---HGVLYVIYCLTCLELTLRYRLKPLRLFFMAAAG 97  Acidothermus ce...
WP_012384870  18 MQWASLLEGTTLVLLVfIAVPLKHLG--GC----PIATSIMGPI---HGLAFLFYVWMMFRLTASADWSKGEMARLLIAA 88  Beijerinckia in...
WP_012787275  12 YRVMALFTGTMLLLLTfVVIPLQLWA--HN----KTLEKPVSII---HGYGYMVYLIVALDLCLRARYKPIRTILILLVG 82  Catenulispora a...
WP_012802238  23 WQVLAFIESLALLVLIgV-MIAKYGF--GM----DRLSEIWSPI---HGFIFMAYALASAVLCFGLAWGLGRMVWIMLSG 92  Kytococcus sede...
WP_015770940  25 YQVMAYVTGVMLLLLT-VEMLIIYAF--QA----THLKPYIAWIpfaHGWIYVVYLITVVDMWVKMRWDFTRLITMILGG 97  Jonesia denitri...
WP_015804361   8 FRLMAYVVGVGLLGLV-VAMLFKYLG--DS----ETLMRIVGPV---HGFLYAIYLVLTVDLALKARWTIKSTVLVLLAG 77  Actinosynnema m...
ZP_04027791  103 TIPFASFYFEKKNS 116 Tsukamurella paurometabola DSM 20162
ZP_05499028   80 LIPFGGLWSHRMMR 93  Thiomonas intermedia K12
ZP_04943058  102 VVPFAGLASAGWIA 115 Burkholderia cenocepacia PC184
WP_015748715 120 TIPFVSFVAEKQVq 133 Nakamurella multipartita
WP_011718894  98 FVPFLSFVVERKTT 111 Acidothermus cellulolyticus
WP_012384870  89 LIPFGAFANERILR 102 Beijerinckia indica
WP_012787275  83 VVPFLAFYYERIVv 96  Catenulispora acidiphila
WP_012802238  93 CIPFWSFIMERRVS 106 Kytococcus sedentarius
WP_015770940  98 VVPVMSFVVERRVT 111 Jonesia denitrificans
WP_015804361  78 TIPFVSFYAERKVV 91  Actinosynnema mirum
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