Conserved Protein Domain Family
PRK05182

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PRK05182: PRK05182 
DNA-directed RNA polymerase subunit alpha; Provisional
Statistics
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PSSM-Id: 235359
Aligned: 1010 rows
Threshold Bit Score: 267.734
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
15807122    3 QKRPQLKARVDG----DYGEFVLEPLARGYGVTIGNPIRRILMSSIPGTAVTSVYIEDVLHEFSTIPGVREDVIRLILNL 78 
28493495    1 MLIAHRPTLIEKkvsdIRSRFIIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSINIQGVMHEFSTIPGVKEDVTEIVLNV 80 
28572392    1 MLIAHRPTLIEKkvsdIRSRFIIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSINIQGVMHEFSTIPGVKEDVTEIVLNV 80 
38233158    1 MLISQRPTLTEEyvdsARSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIKIDGVLHEFTTINGVKEDVSDIILNI 80 
172040041   1 MLISQRPELSEEfiddSRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSLRIDGVLHEFTTVPGVKEDVSDIILNI 80 
227832273   1 MLISQRPQLTEEfidsSRSKFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIKIDGVLHEFTTINGVKEDVSEIILNV 80 
237786334   1 MLISQRPQLTEEyidsSRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSVRIEGVLHEFTTVPGVTEDVSDIILNI 80 
297571895   1 MIIEQRPTLTEEkisdTRSRFTLNPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIHIDGVLHEFSTIEGVKEDVAQIILNL 80 
300857809   1 MLISQRPTLTEEyvdsARSRFIIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSVKIDGVLHEFTTINGVKEDVSDIILNI 80 
68536848    1 MLISQRPALTEEfiddSRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSLRIEGVLHEFTTIPGVKEDVSDIILNI 80 
15807122   79 KELVVKFhaPGPKTLTLRAQGEGEVRASAFEVPTDAEIVNPDLVIANLAEDGKLVMEVRVEEGEGYVSADKHAt-KDRI- 156
28493495   81 KRLVISSeiDEPFTVRLYKTGEGEVLAKDIEVPTGIEIGNGDLVIATLAKDAVFDMQLTIERGRGYVSAEQNRndGMSLa 160
28572392   81 KRLVISSeiDEPFTVRLYKTGEGEVLAKDIEVPTGIEIGNGDLVIATLAKDAVFDMQLTIERGRGYVSAEQNRndGMSLa 160
38233158   81 KGLVLSSdsDEPVVMYLRKEGAGVITAGDIEPPAGVEIHNPDLHLATLNEQGRLDIEMIVERGRGYVPATLYSg-PAEI- 158
172040041  81 KSLVLSSdfDEPVTMYLRKEGAGAVTGADIETPAGVEVHNKDLHIATLNEQGKLDIELVVERGRGYVPAATSTd---eI- 156
227832273  81 KGLVLSSdsDEPVVMYLSKEGPGEVTAGDIQPPAGVEIHNSDLHIASLNESAKLEMELVVERGRGYVPAAATSg---eI- 156
237786334  81 KGLVLSSdsDDPVTMYIRKEGPGEVTAGDIMPPAGVEIHNPDMHIATLNEQGKLDIELVVERGRGYVPAAQATg---eI- 156
297571895  81 KDLVVTSenDEPVQMYLRKAGPGQVTAEDITPPAGVEIHNPELLIATLNEKGKLEIDLTVERGRGYVSAQQNNspDYEI- 159
300857809  81 KGLVLSSdsDEPVVMYLRKEGAGVVSAGDIEPPAGVEIHNPDLHIATLNEQGRLDIEMIVERGRGYVPASLYAg-TNEI- 158
68536848   81 KSLVLSSdsDEPVSMFIRKEGPGEVTGADVEVPAGVEVHNQDLHIATLNEQGKLEIEMTVERGRGYVPAATASs---eI- 156
15807122  157 NSIPVDAMFSPVRRVAYHVENTRVGQQTDLDRLILRVWTDGSAGPQEALDKAVEILRDELSVFGNVEpmpalessyaaat 236
28493495  161 GHIPVDSIYSPVHKVTYRVEATRAGERTDFDRLIIDVETKPSILPRDAVASAGKTLCELFGLARELNs------------ 228
28572392  161 GHIPVDSIYSPVHKVTYRVEATRAGERTDFDRLIIDVETKPSILPRDAVASAGKTLCELFGLARELNs------------ 228
38233158  159 GRIPVDQIYSPVLKVSYKVEATRVEQRTDFDKLIIDVETKNSMAPRDALASAGKTLVELFGLARELNt------------ 226
172040041 157 GRIPVDQIYSPVLKVSYKVEATRVEQRTDFDKLILDVETKSSMSARDAMASAGKTLVELFGLAQELNi------------ 224
227832273 157 GRIPVDQIYSPVLKVSYKVEATRVEQRTDFDKLIIDVETKNSISARDALASAGGTLVELFGLARELNt------------ 224
237786334 157 GRIPVDQIYSPVLKVSYKVEATRVEQRTDFDRLVIDVETKNSITARDAMASAGGTLVELFGLARELNt------------ 224
297571895 160 GRIPVDSIYSPVVKVSYKVEATRVGQRTDFDKLIVDVETKPSMAPRDAFASAGKTLVELFGLTTELNq------------ 227
300857809 159 GRIPVDQIYSPVLKVSYKVEATRVEQRTDFDKLIIDVETKNSIAPSDALASAGKTLVELFGLARELNt------------ 226
68536848  157 GRIPVDQIYSPVLKVSYKVEATRVEQRTDFDKLILDVETKNSITARDAMASAGKTLVELFGLAQELNh------------ 224
15807122  237 paavydpatatlpasVYDSprQPDlGSLSINPqpfptDQDTPRVTLEGLGLTTRVLHSLKEEGIDSVDALCALSDRDLKK 316
28493495  229 ---------------QAEG--VEFgVDSMIPE-----SDEDLRIPIEDLGLSVRSYNCLKREGVNYVSELLGFSEQELLD 286
28572392  229 ---------------QAEG--VEFgVDSMIPE-----SDEDLRIPIEDLGLSVRSYNCLKREGVNYVSELLGFSEQELLD 286
38233158  227 ---------------AAEG--IEIgPSPQETE-----YIAAYGMPIEDLNFSVRSYNCLKRQEIHTVGELAECTESDLLD 284
172040041 225 ---------------EAEG--IEIgPSPQESE-----HIAAYNMPIEDLDFSVRSYNCLKREEIHTVGELAARTESDLLD 282
227832273 225 ---------------AAEG--IEIgPSPQETE-----YIAAYSMPIEDLNFSVRSYNCLKRQEIHTVGELAECTESDLLD 282
237786334 225 ---------------AAEG--IEIgPSPQESE-----HIQAYGMPIEDLNFSVRSYNCLKREEIHTVGELASRTESDLLD 282
297571895 228 ---------------EVEG--LELkEAPVVEQ-----QSSDLQRPITILNLPARSQNCLQREGIHTIGELVLRSEADLLD 285
300857809 227 ---------------AAEG--IEIgPSPQETE-----YIAAYSMPIEDLNFSVRSYNCLKRQEIHTVGELAECTESDLLD 284
68536848  225 ---------------EAEG--IEIgPSPQESE-----HIAAYSMPIEDLNFSVRSYNCLKREEIHTVGELAARTESDLLD 282
15807122  317 VPGIGERSLDEIKQQLAQFGLALRD 341
28493495  287 IRNFGQKSADEVQEKLAELGHSLKG 311
28572392  287 IRNFGQKSADEVQEKLAELGHSLKG 311
38233158  285 IRNFGQKSINEVKIKLAGLGLTLKD 309
172040041 283 IRNFGQKSINEVKVKLAGLGLALKD 307
227832273 283 IRNFGQKSINEVKIKLANLGLALKD 307
237786334 283 IRNFGQKSINEVKVKLAGLGLALKD 307
297571895 286 IRNFGAKSIEDVKDELAKLDLRLKD 310
300857809 285 IRNFGQKSINEVKIKLAGLGLFLKD 309
68536848  283 IRNFGQKSINEVKVKLAGLGLGLKD 307
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