Conserved Protein Domain Family
GBBH-like_N

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pfam06155: GBBH-like_N 
Gamma-butyrobetaine hydroxylase-like, N-terminal
This domain is found in several proteins including gamma-butyrobetaine dioxygenase, Fe-S cluster assembly factor HCF101 and trimethyllysine dioxygenase proteins. Gamma-butyrobetaine hydroxylase (GBBH) is a alpha-ketoglutarate-dependent dioxygenase that catalyzes the biosynthesis of L-carnitine by hydroxylation of gamma-butyrobetaine (GBB). GBBH is a dimeric enzyme. The monomer consists of a catalytic double-stranded beta-helix domain and a smaller N-terminal domain. The N-terminal domain has a bound Zn ion, which is coordinated by three cysteines and one histidine. The N-terminal domain could facilitate dimer formation, but its precise function is not known. Other family members have been suggested to be involved in FeS cluster maintenance (see Supplementary note 5 in.)
Statistics
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PSSM-Id: 461840
Aligned: 159 rows
Threshold Bit Score: 63.0102
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
jgi:AciX9_0637       35 RVMKSEGTGVAIEWKDGHHSAWNFAWLRAGCPCATCN----EER---NASgrkpgevkpsaptgplvlyqAPPRPVDVTP 107
jcvi:FSU_2472         6 kvfrTKEGKLGFEWNDGSRTACDARTLRLACPCALCVdehtGEKlldESTv------------------pLDVKLEHIQS 67 
WP_014857091          4 ekitAGKNNFVISWSDGAISEIKYANLRALCPCASCR----AEA---ENNgknyi----------piyseAEITVDRIEP 66  Meliorib...
jgi:Plim_2386         7 ervANTGETLELVWADGLVQHITWSDLRRKCPCAVCQ----VER---EKPtpveplkpasllavidraetLPIKPTSFRA 79 
XP_002293925        352 VSYDVEKSILRVDDGDIQNATISPAELRRGCRCAACVeeltGKQilnPASi------------------sESVKPLNMSP 413
CASKLGSI:MRBBS_1947 343 glLRRDPRTLSVLWEDGHRDDFDVRDLRLACHCALCV----EEM---SGRklldp-----------ktirPDVTPQKIVS 404
WP_014960230          7 svkpvEGRSVLIEWQDGHSSLYENVYLREHCQCAECV----HEW---TGEklisr-----------eripADIRPVSVSA 68  Leptospi...
WP_013924208         11 siqQKDNHTFSIEWNDGHRMNYRLSDLQRVCPCAGCW----DDA---NQErlnlp-----------qnspDNLTALKITS 72  Parachla...
Q6MEM0               16 qiLQKDNHTFLVIWSDGKKQEFRLSQLQEKCPCANCR----DKN---KGNrllnl-----------tsvkEDVKAFSIRN 77  Candidat...
unil:wcw_1674         8 EIRQKDNYHFSIEWTDGKVIDYRLSDLQKMCPCANCV----DGS---TGErktna-----------kfvdEQVRAVKIAS 69 
jgi:AciX9_0637      108 VGKYAIRFKWNDGHESGIYSWDYLR 132
jcvi:FSU_2472        68 IGRYAVGLSFSDGHRSGIYPYDKLk 92 
WP_014857091         67 VGNYALKIIWKDGHDTGIYEFNYLt 91  Melioribacter roseus
jgi:Plim_2386        80 VGNYAYAISFSDGHSSGIYSLSTLR 104
XP_002293925        414 TGNYALSVDWSDGHR-SLYPYRQIr 437
CASKLGSI:MRBBS_1947 405 IGNYAVKFDWNDGHNSGIYSFNNLR 429
WP_014960230         69 VGNYALSIRFSDGHGTGVYSYELLR 93  Leptospirillum
WP_013924208         73 VGRYALQIRFSSGCSNGIYCYDFLH 97  Parachlamydia acanthamoebae
Q6MEM0               78 VGRYALQIHFNTGCSMGIYSFEMLR 102 Candidatus Protochlamydia amoebophila UWE25
unil:wcw_1674        70 VGRYAIRIDFTSGCSMGIYNFEDLR 94 
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