7O3W,7ABK


Conserved Protein Domain Family
PspA_IM30

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pfam04012: PspA_IM30 
PspA/IM30 family
This family includes PspA a protein that suppresses sigma54-dependent transcription. The PspA protein, a negative regulator of the Escherichia coli phage shock psp operon, is produced when virulence factors are exported through secretins in many Gram-negative pathogenic bacteria and its homolog in plants, VIPP1, plays a critical role in thylakoid biogenesis, essential for photosynthesis. Activation of transcription by the enhancer-dependent bacterial sigma(54) containing RNA polymerase occurs through ATP hydrolysis-driven protein conformational changes enabled by activator proteins that belong to the large AAA(+) mechanochemical protein family. It has been shown that PspA directly and specifically acts upon and binds to the AAA(+) domain of the PspF transcription activator.
Statistics
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PSSM-Id: 461130
Aligned: 13 rows
Threshold Bit Score: 118.629
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
7O3W_A   2 LFDRLGRVVRANLNDLVSKAEDPE--KVLEQAVIDMQEDLVQLRQAVARTIAEEKRTEQRLNQDTQEAKKWEDRAKLALT 79 
Q55707   3 LFDRLGRVVRANLNDLVSKAEDPE--KVLEQAVIDMQEDLVQLRQAVARTIAEEKRTEQRLNQDTQEAKKWEDRAKLALT 80  Synechocystis sp. PCC...
P74717   3 LFNRVGRVLKSQLTHWQQQQEAPE--DLLERLLGEMELELIELRRALAQTIATFKSTERQRDAQQLIAQRWYEKAQAALD 80  Synechocystis sp. PCC...
Q9KDL6   2 VFDRMKNLVLASIHEGLDKLEDPE--MMLNQYIRNVQSEMGRAEKAIEEQKKLHVSLERDLEEAKRLMKRREEQAKAALS 79  Bacillus halodurans
O32201   2 VLKRIRDMFVASVHEGLDKMENPK--VMLNQYVRDMESDIAKAKQTIVKQHTIAYQFKKKYEEAAEVAGKRKNQAQLAFD 79  Bacillus subtilis sub...
Q9KRG4   3 IFSRFADIVNSNISALLDKAEDPE--KMIRLIIQEMEDTLVEVRTNSAKAMADKKELARKVESIEQQLEDWQNKATLALT 80  Vibrio cholerae
Q9RUB7   3 IFDRLSRLLRANVNDMISKAEDPA--KIIDQALRDMRSAYADARNEVAGAMAQAAKLEREAGTNSKLAAEYEKKAEEALR 80  Deinococcus radiodura...
O67361   4 LLKRLLRVVRAEAHSVVEKLEDPI--KITEEGLRELRKQLKEAMEALAQVKASQIRFEREARNEKERAKALVKKAESLLL 81  Aquifex aeolicus
Q9A5T5   3 IWSKLSALFRGAAHDGAQTVVDANalRILDQEIRDADSAQGKARDELAKLVARRRALETEVAQLTDQSRKYESSARAAMN 82  Caulobacter vibrioides
Q9HXR1   3 VWSKLLSALRGGANEVGEAIVDSQalRILDQEIRDADVELRKSREALASIMARHRLAQERVEKGAAQVAEYEQYAIKALE 82  Pseudomonas aeruginosa
P0AF78   3 ILKSLFTLGKSFISQAEESIEETQgvRMLEQHIRDAKAELDKAGKSRVDLLARVKLSHDKLKDLRERKASLEARALEALS 82  Escherichia coli K-12
P9WHP5   4 PFVKAWKYLMALFSSKIDEHADPK--VQIQQAIEEAQRTHQALTQQAAQVIGNQRQLEMRLNRQLADIEKLQVNVRQALT 81  Mycobacterium tubercu...
7ABK_A  25 LFNRVGRVLKSQLTHWQQQQEAPE--DLLERLLGEMELELIELRRALAQTIATFKSTERQRDAQQLIAQRWYEKAQAALD 102
7O3W_A  80 NG--------------EENLAREALARKKSLTDTAAAYQTQLAQQRTMSENLRRNLAALEAKISEAKTKKNMLQARAKAA 145
Q55707  81 NG--------------EENLAREALARKKSLTDTAAAYQTQLAQQRTMSENLRRNLAALEAKISEAKTKKNMLQARAKAA 146 Synechocystis sp. PCC...
P74717  81 RG--------------NEQLAREALGQRQSYQSHTEALGKSLGEQRALVEQVRGQLQKLERKYLELKSQKNLYLARLKSA 146 Synechocystis sp. PCC...
Q9KDL6  80 AG--------------EEELAKKALYSKKNAAEQVARYEALMQKSHDHVLELRLQLEDLEKKYEQLRDKKRELLLRSQSI 145 Bacillus halodurans
O32201  80 AG--------------EEELAKKALTEMKYLEGKAAEHKASYEQANSQLADLKEQLAALETKLQDVKDKKQALIARANAA 145 Bacillus subtilis sub...
Q9KRG4  81 KQ--------------REDLARAALIEKQKLQHVLKGLHTEQMLVEETIEKLTGEIGKLETKITETRAKQQALAIRSQAA 146 Vibrio cholerae
Q9RUB7  81 GG--------------SEDLAREALRRAQNHKDLAKGFDEQRTVQQSTVDQLKTQLRALEAKIDEMESKKTLLAARQKTA 146 Deinococcus radiodura...
O67361  82 QAqegki-----speeAEKLAAELIQKAELHEKNARRLEEEAKRQREMAVKLQAKIDELKVQIAKYEAELKTLKARLATA 156 Aquifex aeolicus
Q9A5T5  83 KG--------------DQALALEVAQRIADLEKDAGQKSTQMTELRAAEEKLRTVIAQTDTKVEALRREIEIVKVNESVQ 148 Caulobacter vibrioides
Q9HXR1  83 AG--------------NEELAREVAEKIATLENQLEGERAQVAEFAASVAQLRKSVSQAEGNIRQLKQQVDTVKATESVQ 148 Pseudomonas aeruginosa
P0AF78  83 KNv-------------NPSLINEVAEEIARLENLITAEEQVLSNLEVSRDGVEKAVTATAQRIAQFEQQMEVVKATEAMQ 149 Escherichia coli K-12
P9WHP5  82 LAdqataagdaakateYNNAAEAFAAQLVTAEQSVEDLKTLHDQALSAAAQAKKAVERNAMVLQQKIAERTKLLSQLEQA 161 Mycobacterium tubercu...
7ABK_A 103 RG--------------NEQLAREALGQRQSYQSHTEALGKSLGEQRALVEQVRGQLQKLERKYLELKSQKNLYLARLKSA 168
7O3W_A 146 KANAELQQTLGGLG---TSSATSAFERMENKVLDMEATSQAAGELA-----------G-FG----IENQFAQLEAS-SG- 204
Q55707 147 KANAELQQTLGGLG---TSSATSAFERMENKVLDMEATSQAAGELAgfgienqfaqlEaSSgvedELAALKASMAGgAL- 222 Synechocystis sp. PCC...
P74717 147 IAAQKIEEIAGNLD---NASASSLFERIETKILELEAERELLNPPP-----------SpL------DKKFEQWEEQqAV- 205 Synechocystis sp. PCC...
Q9KDL6 146 KAFEQMKKARATFS---TEGSERQFQRMEEKIEDMELRESAREGRRg----------FsVD----YDEQVEQEFLNmKK- 207 Bacillus halodurans
O32201 146 KAKEHMNTTFDKID---SESAYREFLRIENRIEEMEIRANYSKSAEa---------gTeLT----RKEFADDVEAEiEK- 208 Bacillus subtilis sub...
Q9KRG4 147 SHRRDVQRHLHAGR---TEEAMAKFEQFSRKVDELEAEADLYAQSG-----------QaRS----LEQEFAELQAQdEI- 207 Vibrio cholerae
Q9RUB7 147 QAGETLDRVSGFSK---AGGAMDAFNEMEQKVAGMEDRNKAMGELR-----------NdQd----FDAQLKDLGRDkDV- 207 Deinococcus radiodura...
O67361 157 RAVKKVNKQIAKVD---PSDTIAMLERMKEKVEEEETLAQAYEELAk----------QeVA----LDVESEAEKKLkEVe 219 Aquifex aeolicus
Q9A5T5 149 KAQAAVISRSGSASg-vVGSAADSLKRIKERQAVREEQFRLHSESE-----------DrKTga-dLDAKLAAAGILpGA- 214 Caulobacter vibrioides
Q9HXR1 149 KAQMAVAQRYGNSKs-kLQTAVDSLERIKQRQAERAATMDAAAELA-----------SaAApddaLDAKLRAAGIKaSG- 215 Pseudomonas aeruginosa
P0AF78 150 RAQQAVTTSTVGASs-sVSTAAESLKRLQTRQAERQARLDAAAQLE-----------KvADgr-dLDEKLAEAGIGgSNk 216 Escherichia coli K-12
P9WHP5 162 KMQEQVSASLRSMSelaAPGNTPSLDEVRDKIERRYANAIGSAELAe---------sSvQG----RMLEVEQAGIQmAGh 228 Mycobacterium tubercu...
7ABK_A 169 IAAQKIEEIAGNLD---NASASSLFERIETKILELEAERELLNPPP-----------Sp------LDKKFEQWEEQqAV- 227
7O3W_A 205 V--EDELAALKA 214
Q55707 223 PgtSAATPQLEA 234 Synechocystis sp. PCC 6803 substr. Kazusa
P74717 206 ---EATLAAMKA 214 Synechocystis sp. PCC 6803
Q9KDL6 208 ---SLVDTKNAS 216 Bacillus halodurans
O32201 209 ---MRTLSLQKS 217 Bacillus subtilis subsp. subtilis str. 168
Q9KRG4 208 ---EKELNKLKA 216 Vibrio cholerae
Q9RUB7 208 ---DDALAALKA 216 Deinococcus radiodurans R1
O67361 220 S--KQKLEELKK 229 Aquifex aeolicus
Q9A5T5 215 SgaEDVLARLMA 226 Caulobacter vibrioides
Q9HXR1 216 NsvDGVLARLKE 227 Pseudomonas aeruginosa
P0AF78 217 SsaQDVLARLQR 228 Escherichia coli K-12
P9WHP5 229 SrlEQIRASMRG 240 Mycobacterium tuberculosis H37Rv
7ABK_A 228 ---EATLAAMKA 236
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