Conserved Protein Domain Family
Peptidase_M50B

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pfam13398: Peptidase_M50B 
Peptidase M50B-like
This is a family of bacterial and plant peptidases in the same family as MEROPS:M50B.
Statistics
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PSSM-Id: 433175
Aligned: 63 rows
Threshold Bit Score: 89.1728
Created: 25-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q5HR99             23 GLLYVIIHyyrnkgvnaFLDIYLNYIPVLTHEFGHVLFNKLAGGKAKDLVIVTSprerkvtsQQGYAIT--QS---KGYL 97   Staphyloc...
Q2N7A2             22 AALFVLPHlpl----gnYVLYPFMILTTWFHEMGHGLSAILVGFQFERLVLFPD--------GSGFAET--YRpndASGL 87   Erythroba...
Q8DIG7             34 TIILWQIPlg------nYLLYPFTILATWFHEMGHGLTAILLGGYFRELVIYPS--------GSGFARY--GGevfLGNL 97   Synechoco...
Q2JH97             53 GLTVLLWQlpw----gnYILYPFTILATWFHEMGHGLTAVLLGGEFHRLEIYPD--------GSGLAIH--SGelfLGRV 118  Synechoco...
WP_012409069       36 ALLWQVPGg-------dYILYPFTILATWFHEMGHGLMALLLGGQFQKLQIFSN--------GSGVATYgiRSs--FGPI 98   Nostoc pu...
EFC38703         1395 VLIWQLPSdv-----grYIAYPFTIFGTFWHEMGHATSALLCGNSLKYIIIESN--------GSGLTVY--ADy-aDSRI 1458
jgi:CAP2UW1_0993   29 ALIVVTWQlpy----grSILYPFSLLATCAHELGHGLTALLVGGEFSSFALYAD--------GSGLALW--RGt--GGRL 92  
jgi:Hoch_6617      32 AALYVVPYg-------hTVAYPLLLISTLVHELGHGLAAMLVGGNFERFVMFAD--------GSGQALS--SGa--FNGL 92  
XP_002906522       27 AIFKLWRV---------SILHPFKILTVFLHELGHATAAWLTCGSVKGMEVHPD--------EGGVTKT--IG-----GL 82  
WP_003515627       13 AVVLLWNQ---------VILKPFRVLSMLFHKMGHAVVAFLFGYGSNAFEAAFG--------SMGDSM---VGa--QGWF 70   Acetivibr...
Q5HR99             98 GQFITTIGGYLMPPLMFLTGLVSI--HY-QYP---SI-FI-T--IYL-FIFIYYFFITsRKLSPL---IVIILISSLLYL 163  Staphyloc...
Q2N7A2             88 SQALVSAGGPIMPAVVGSGLILSSa-KP-ALW---RP-VL-Yl-LGG-AIALSTVLYV-RSTLGW---IILPAIAAGIFY 154  Erythroba...
Q8DIG7             98 GHGLVAIGGPLGPAIAGSLFILSS--RS-HRAt--DL-CL-Ka-LGM-MIVVSLLLWV-RSLFGI---VFMTLVGIATLL 164  Synechoco...
Q2JH97            119 GQALVAAAGPMGPPLAGALFILAS--RR-HSTt--RLgLV-L--LGS-LLLLSTLLWV-RSPFGL---LFLLGMGLGILA 185  Synechoco...
WP_012409069       99 GPAMAAAAGPMGPPLAGAALILAS--RSfKAA---SL-SLkI--LGS-FLLLSTLIWI-RSWFGL---VAIPLLGLIILG 165  Nostoc pu...
EFC38703         1459 CNAIISVNGPLGPTFFGCLIICLSvlFV-KHEifsRI-LL-GliSVI-VFVCTVLLVR-KSLFGI---IFLPCLAVILLV 1530
jgi:CAP2UW1_0993   93 STALVAAGGLLGPSIAGSLLIILAr-SA-RQA---RA-ML-W--LVAgGLLGVVVVWA-RNPFGV---IFLVASALFFAA 159 
jgi:Hoch_6617      93 EHAFIAAGGLIGPAVGAAFCLIFAr-RT-STA---RY-CM-Gt-IGV-LMLIAEVAVV-RNPFGL---AFVGIFAALCLL 159 
XP_002906522       83 QWV-ILPAGYLGSAVWGMALTIAS--AD-KTAs--EV-AA-G--VLI-FFLLIFIFYA-HNGYLRilnFCFILLLAGLLA 150 
WP_003515627       71 PSFMISSGGYLGSILFFALIMFLK--KT-NAK---KY-LL-G--SLA-IIYLFISISV-PALRGT---VLYAAVFTAIAI 135  Acetivibr...
Q5HR99            164 VFKQDHQWFIYdivTLSYHFILGVLLGEIL-QsswtI-----------FRLt-----F------QR---PKPSWDGSALT 217  Staphyloc...
Q2N7A2            155 IAARGTPWVER---FALQFLGLTASLSMFQ-Q----W-----------DYLlmeravI------GG---QEILSDTGAIE 206  Erythroba...
Q8DIG7            165 VAYRGNCWLKG---IAIQFLGVQACISTFQ-Q----V-----------DYL------F------TDaipGGQLSDTGLLQ 213  Synechoco...
Q2JH97            186 VARWASPWLRG---FAAQFLGVQACVSTYH-Q----L-----------DYLftasavI------NG---QVIHSDSSQIA 237  Synechoco...
WP_012409069      166 IALKAPRWAQG---FAIQFLGVQACVSTYH-Q----L-----------DYL------Fss---sAG---PLGISDTAQMQ 214  Nostoc pu...
EFC38703         1531 MSVKANGKILT---FSLQFIGVQMAISMYQ-N----I-----------LYL------F------SK---MDGKSDTGSVE 1576
jgi:CAP2UW1_0993  160 VALWLGDRAVT---FVLRLTGALLCLSWLQ-D----L-----------DYL------FtssaviGG---MRHASDTAVIA 211 
jgi:Hoch_6617     160 FAFKAGPQLVQ---LALVFLGVQLALSVYS-R----S-----------DYL------FtptaqtAV---GASPSDAQAIA 211 
XP_002906522      151 LNIWTTFDALQ---YVTLFLGVMSCLFSVY-D----Iw----------DDL------I------SR---RVNESDASVFA 197 
WP_003515627      136 LLYMIQRGGVE---EIAIDVVAMSSVAYIIyEt---LvdtvlfkinqqFSI------I------KGw-nTGIPLDMARLK 196  Acetivibr...
Q5HR99            218 KVTR-VPTFIF--SLVWILFNLYTVYL 241  Staphylococcus epidermidis RP62A
Q2N7A2            207 ESLF-LPHWVW--AIGIIALAAGMIGA 230  Erythrobacter litoralis HTCC2594
Q8DIG7            214 QYLW-LPYWLW--GAMISVITLWLLLW 237  Synechococcus elongatus
Q2JH97            238 QNLF-LPYWFW--GGVMAVSSLVLLIT 261  Synechococcus sp. JA-2-3B'a(2-13)
WP_012409069      215 RYLL-LPYWFW--GGLMAIASLVILAQ 238  Nostoc punctiforme
EFC38703         1577 VLFN-GLVPYWmvAIFIIIVNVILILV 1602
jgi:CAP2UW1_0993  212 QALW-LPYWFW--GGVIALTSLAVLAL 235 
jgi:Hoch_6617     212 DAMGfAPYWFW--GGLCGAFSVVVLIV 236 
XP_002906522      198 KMTH-TSSRCW--GVIWGLIALVSLVA 221 
WP_003515627      197 NITG-LPELLW--AVVWIVIAVLVINA 220  Acetivibrio thermocellus
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