Conserved Protein Domain Family
TraF_2

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pfam13729: TraF_2 
F plasmid transfer operon, TraF, protein
Statistics
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PSSM-Id: 433437
Aligned: 28 rows
Threshold Bit Score: 151.362
Created: 25-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_015047639               49 INPANVGFDRQQiSStsfSAG----RLHLSGGLEYGNVQELFDGYD-----ELSAWLKdndsggnnggggnpdqppkpid 119 Si...
WP_013660164               46 YNPAAPFLMVNNkDGdrfRMGl---FGPMAFGYEFGQVDSLEEKID-----ELDETLDkele------------------ 99  Ma...
WP_015819298               46 TNPAHIGLAIREqENv--RFNf---LPALSVYTEVGAVDNFVDDLD-----ELIDILDdpst------------------ 97  Te...
Q21KU5                     45 HNPAMNNFMVHEeETy--RFNf---GPAFSYGIELGDVGNFADDLD-----DLIDIIDdpds------------------ 96  Sa...
jgi:Hhal_0810              46 QNPAGPIAASDR--------GvrmgVFALGLSYELGDVADFSDDFE-----ALGEELEdlerlleeves----------- 101
Academia_Sinica:M5M_11485  50 gNPAAQAYDRSRmDQddgVIG----GLHLGAGLEYGNVSELFDKVD-----DIADSLLsdsglaekniyni--------d 112
WP_013908722               50 YNPALLGIH---------RYGt---QISISAGVGIREV-NLVDHIDkladvGIESTIDeaiqyiedngl----------- 105 Th...
tigr:TERTU_0215            55 YNPALLALNDES-ENrtrDSRf---VFPNLVVQVDDSVEAVIDAADdnlqeNLERAVDgynssrs--------------- 115
jgi:Hhal_1892              77 GNPAGAAAAD--------RVGvqfgLGSVGVGYELGPVDGLVDEID-----DIIDILDrddl------------------ 125
WP_011814850               55 GNPAALGLQRQRf-----QAGi-----HAGLAAELGPVDQLIDELD-----DLQDRLDdglspgdfe------------- 106 Ha...
WP_015047639              120 pidpdleriieeFKAEATRIGAILAVIATEGyAN----TDLGTD---LALVFNREWLg--GTWGLDVSYAGSASAVGFve 190 Si...
WP_013660164              100 --------taedVDKALRDVNELISSMDENAtGK----GMFSSQiplFPMIYRSPQY---GAFMFDASLTGLVKGSFLa- 163 Ma...
WP_015819298               98 --------tddsVDEVLDRFNGLLVTMGEEGyLT----TKVGLSaplFPFYFRSRPLd--MVFSAELSFNGSVGMRVLdd 163 Te...
Q21KU5                     97 --------tdesPSDVLERFNSVLENMGEHGyIK----NTINVRapvLPLFYKSDRFg--GTFSVDFSLDATIGARVLdd 162 Sa...
jgi:Hhal_0810             102 -gdvdpdnaedeIESFQANVNEILDRIGEDGyLT------AGVTgqfVPFPFETTQDalrGSLLIDLDYSLRGHISVLrg 174
Academia_Sinica:M5M_11485 113 fnnpdlnglvdaIDQEADRVDDLLASIGDSGyAN----ATVNGQ---IPIVFAADVFg--GTLGVEYRYAATASAVALpe 183
WP_013908722              106 --avigtglspeLQDKFKTITSELRAIGTKNgLQlmptASAGVQignFGFGVFGLSEgtaHAVIDPDHLDIIVKAEVTvn 183 Th...
tigr:TERTU_0215           116 ------aeaageVANRARQLETLLVDLGNQQ-IE----GEVVFG---LSVSEPSKFEg--GAFFISSRSISFADSTI--- 176
jgi:Hhal_1892             126 --------gpseADDLIERTEGVLAQLGQDGwGK----LQFGGRpplAPLVVGSARSg--WSVALDAEATGHLGFSILdd 191
WP_011814850              107 ----dsadfqaaVEEEVERLQAFLEDAGRDGyVK----ATGHAA---APVRMALPWGe--GGLSLSVRYSGQSRLGILda 173 Ha...
WP_015047639              191 ---------dlDFNAEQALTELQaaynlqpgdpatsfdlsggiilhidpnagtvrgefnnDSLLAIRAARETTVALNYSR 261 Si...
WP_013660164              164 -----------EEAEIQGKSIQT-------------------------------------QSSVYVKDGADLNLSFGYSK 195 Ma...
WP_015819298              164 tlr---fddqnNKFST--------------------------------------------NTSAYVKSGLETKLAFGGSR 196 Te...
Q21KU5                    163 elk---ydqdkDYLT---------------------------------------------NTAIYLKSGIEKRLSFGYGR 194 Sa...
jgi:Hhal_0810             175 edldlsiddqdDAGDALDTLD---------------------------------------GFGGYVRSAVTRTFTLGYGS 215
Academia_Sinica:M5M_11485 184 ---------llNFDTQAALTALQtafdpnnpqtsydltggv--tlavdpltgdvaigfdnDSTLLTRAAKISEFGVSWSK 252
WP_013908722              184 gttqpiyvkydEEQNQLSLSDLQqyqassl-----------------------eyaidngLTYLKLTGLAYFEIPVAYAH 240 Th...
tigr:TERTU_0215           177 -----------PAADYALLADYInamdvlaaggsfadisp----alldgngnlidpsdrfNSSANITAFNLLEWGVSLSR 241
jgi:Hhal_1892             192 elr---fvretEQIQS--------------------------------------------NTAAYLKGGGILRLSAAPSL 224
WP_011814850              174 plt---adiedETAELST------------------------------------------NTSLYVKGAVLRELTLGYGQ 208 Ha...
WP_015047639              262 AFA--LG-DQqWFVGVRPKYVNMGLSGLITRIGDITdsE--SlfddIRDADFNNTGNLSLDAGVLWASDH---YTAGLAV 333 Si...
WP_013660164              196 DIWanQY-GM-LVGGAKLHAHYLTLGKALLVLQEDD--DigDefsdSLEDNQESTFGVGLDVGAIWVAEN---YQLGLTA 268 Ma...
WP_015819298              197 AFYnlLD-GMdVYAGAKLNIIQMELSKQVIALQQMNgeSieDvvedAYDENLKSSTNMSLDLGVSLVAES---FRLGATL 272 Te...
Q21KU5                    195 ELWsyNDmGK-LYGGARLDISNMELSKQVMPLQMLDgrDisDvmtdEYDKNLVSTTAMSVDIGVVWDADF---YRLGLTL 270 Sa...
jgi:Hhal_0810             216 AVYenRQ-GL-LFAGAQLKHHQVELSRMAVGFDDDPgsQls----dEFRENAETDSDLGVDLGVMWVSDR---YRAGASV 286
Academia_Sinica:M5M_11485 253 GLN--MS-GGkLFFGVTPKYTSMGLSNVASRVGDITdaE--ElfddIRDASFKTEGKIGLDAGLLWVAQN---YRLGVTG 324
WP_013908722              241 HIKtqLGd---VYLGGAVKLMPGVTFDGQIKV-DTEsgDis----sELKDADKRDTSWGVDLGILYQPRFvkgLSIGLVG 312 Th...
tigr:TERTU_0215           242 KFE--FF-GQsVALGVTPKVLNIYAISDS---TDFGddDl------dFDDDEQSYLSVNGDVGVLFELFDh--YRVGVAA 307
jgi:Hhal_1892             225 RVAewEG-GReLFVGARVSHYQAELSKAVVALAEDTnrDfgDivedEIDRQQETSSAVGLDLGVMYQTRF---FRAGGAW 300
WP_011814850              209 PVW--SAgGGrLHAGASLTHYQSDLSKIVVPLQDTE--DvgDtlsdEYDANQERDTAIGANAGVVWEADR---YQLGATA 281 Ha...
WP_015047639              334 TDIFEPTYDFNFVGSTGFNNPvv----------------vAAFERLQTFKQARRWRLDSSYisDNKQWAASVSVD 392 Simidui...
WP_013660164              269 TNLNEPEFDYGIIGQNCSSLTgtqidncv---vaaqfasrGEIASSETHVMERQVTIDGAValSDKQWTLATSYD 340 Marinom...
WP_015819298              273 SDINEPSFDYGAVGVNCSDYEessisrsncdtatyfvqeaGEIVSQETYTRHALLTLDGMYrlGSSLFLSGELet 347 Teredin...
Q21KU5                    271 ADINSPSFDYGAVGVNCDEREpgsteqsacyateyfievkGDLKAYETHTKHARATVDGALhiGNKWWLTSALdl 345 Sacchar...
jgi:Hhal_0810             287 ANLIEPTFDYPAVEDDDTFDAaa---------------erGEIDRDESYRMERQLSVEGAVhtDDGRWLLGGSLD 346
Academia_Sinica:M5M_11485 325 TNLLEPSFKFPALDTSGFTNPai----------------tAQLAALETYTLERQFTLEGGLftADHQWSLNIAYD 383
WP_013908722              313 KNLNTPEFDTAT---------------------------------GDTYKVDPQFRLGLAY--DFSAFTFALDAD 352 Thermod...
tigr:TERTU_0215           308 KDLVPEKFTTNS---------------------------------GAELQLKTRSRLGLGY--VRERFSLGLDMD 347
jgi:Hhal_1892             301 KNINEPTFDFPAVGTDCSGEAdpdlqanc----ltaanfsDRITREEAFRLNEQVTLEGALhdPAQRLVLAASYD 371
WP_011814850              282 RNLNKPRLDYPAVGEGCDRLDgeaqtrc-----eaaqdfaGRIDLSETWTLDPQMTLEAAAynEDRTWVLAGSLD 351 Halorho...
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