1G90


Conserved Protein Domain Family
OmpA_membrane

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pfam01389: OmpA_membrane 
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OmpA-like transmembrane domain
The structure of OmpA transmembrane domain shows that it consists of an eight stranded beta barrel. This family includes some other distantly related outer membrane proteins with low scores.
Statistics
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PSSM-Id: 396112
Aligned: 13 rows
Threshold Bit Score: 184.948
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1G90_A         2 PKDNTWYTGAKLGFSQYHDTGf---------------iNNNGPTHENQLGAGAFGGYQVNPY----VGFEMGYDFLGRMP 62  Escherichia coli
P45996        23 PQENTFYAGVKAGQGSFHDGInnngai------kkglsSSNYGYRRNTFTYGVFGGYQILNQdnfgLAAELGYDDFGRAK 96  Haemophilus inf...
P43840        23 PQENTFYAGVKAGQASFHDGLral------------arEYKVGYHRNSFTYGVFGGYQILNQnnlgLAVELGYDDFGRAK 90  Haemophilus inf...
P38368        23 PQENTFYAGVKAGQASFHDGLral------------arEKNVGYHRNSFTYGVFGGYQILNQnnlgLAVELGYDDFGRAK 90  Haemophilus inf...
AAP95060      21 PDANTFYLGAKAGWASTHKDInqfdskyq-ndkrynpeFTTWGIHRNSVTYGVFGGYQIFNQnkmgLALELGYDYYGQMK 99 
AAF95357      18 AAVAEVYVGGKVGKSWLDDACla-----------------gQSCEDDDQVVGAFLGYQANKW----LSLEAGYDYLGKFT 76 
Q44299        23 QAADDWYTGIGAGWAYGHDLNdf-----------------gKDADKDATALSLFGGYNFNDY----YAAELGYLYAGKAG 81  Aeromonas salmo...
WP_005316809  22 HAADDIYFGAGAGAAHFNGLNki---------------egVKNGEENAAAANAFVGYNFNEN----FGSELGYLYTGRGN 82  Aeromonas salmo...
EFP70868      23 PKDNTWYTGAKLGWSQYHDTGf---------------iDNNGPTHENQLGAGAFGGYQVNPY----VGFEMGYDWLGRMP 83 
P02936        23 PKDNTWYAGAKLGWSQYHDTGf---------------iHNDGPTHENQLGAGAFGGYQVNPY----VGFEMGYDWLGRMP 83  Salmonella ente...
WP_010944115  21 PQADTFYVGAKAGWASFHRGInqfdnkyknrkhtavmkEGKLNIRRDSVTYGVFAGYQIFNQnkagLAAELGYDYYGQLS 100 [Haemophilus] d...
P04845        23 PKDNTWYTGAKLGWSQYHDTGfygng--------yqngIGNGPTHKDQLGAGAFLGYQANQY----LGFELGYDWLGRMP 90  Serratia marces...
P09146        23 PKDNTWYAGGKLGWSQFHDTGwyn-----------snlNNNGPTHESQLGAGAFGGYQVNPY----LGFEMGYDWLGRMP 87  Klebsiella aero...
1G90_A        63 YKGSVE--------------------------NGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVFRADTKSNVYG---- 112 Escherichia coli
P45996        97 LREAGKp-------------------------KAKHTNHGAYLSLKGSYEVLDGLDVYGKAGVALVRSDYKFYEDAngtr 151 Haemophilus inf...
P43840        91 GREKGKt-------------------------VVKHTNHGTHLSLKGSYEVLEGLDVYGKAGVALVRSDYKLYNENsstl 145 Haemophilus inf...
P38368        91 GREKGKt-------------------------VAKHTNHGAHLSLKGSYEVLDGLDVYGKAGVALVRSDYKFYEDAngtr 145 Haemophilus inf...
AAP95060     100 GSSQNKvaldvptprgprppihkpkpkgdlnrQFKHTAHGANLSLKPSYEILPNLDVYGKVGMGLVRNDYKFILDLqskd 179
AAF95357      77 AAG-----------------------------LNDEKVQAVTLAPKLSIPLTEGIALYGKVGGAYVDYGS---------- 117
Q44299        82 VD---------------------------------FKTQGATLSGLARLPLNDIFSVFAEGGAYFNHVNGn--------- 119 Aeromonas salmo...
WP_005316809  83 TDG------------------------------NRYENQGATLSGIARLPLGGDFSAFAEGGAYWAHTDGm--------- 123 Aeromonas salmo...
EFP70868      84 YKGSVE--------------------------NGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKAHNNVtge- 136
P02936        84 YKGDNI--------------------------NGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKSNVPGgp-- 135 Salmonella ente...
WP_010944115 101 AKFKHAeknsiqfpvvsa--mkdratdnneeyVVRHTAHGVNFSLKPSYELLPDLDAYAKVGIGLARNDYSVKPKKkavn 178 [Haemophilus] d...
P04845        91 YKGSVN--------------------------NGAFKAQGVQLAAKLSYPIADDLDIYTRLGGMVWRADSKANYGRtgq- 143 Serratia marces...
P09146        88 YKGVKV--------------------------NGAFSSQAVQLTAKLGYPITDDLDIYTRLGGMVWRADS-----Snsi- 135 Klebsiella aero...
1G90_A       113 --------KNHDTGVSPVFAGGVEYAITPEIATRLEYQFTNNIGDAHTIGT------------RPDNGMLSLGVSYRFGQ 172 Escherichia coli
P45996       152 ----dhkkGRHTARASGLFAVGAEYAVLPELAVRLEYQWLTRVGKYRPQDKpnta-----inyNPWIGCINAGISYRFGQ 222 Haemophilus inf...
P43840       146 ----kklgEHHRARASGLFAVGAEYAVLPELAVRLEYQWLTRVGKYRPQDKpnta-----lnyNPWIGSINAGISYRFGQ 216 Haemophilus inf...
P38368       146 ----dhkkGRHTARASGLFAVGAEYAVLPELAVRLEYQWLTRVGKYRPQDKpnta-----inyNPWIGSINAGISYRFGQ 216 Haemophilus inf...
AAP95060     180 qh-vkdetKLHTLKPSLLLGTGVEYAITPELALRTEYQYLNKAGNLYKAAKyknis--tslayAPDIHSVSVGLSYRFGQ 256
AAF95357     118 -----------KDDYSYLGAAGLEFNTNHNVTMRLEYQNLTDINNDIVRAR---------------AETATLGIAYKFGG 171
Q44299       120 --------GNSDNGTAPLAGLGLTAKLSDLIDVQARYRYMWNLGDEQKTw-------------ETNMSVATLELVMHPNR 178 Aeromonas salmo...
WP_005316809 124 --------GTSDTKVSPLAGLGVTYQVNDALDLQARYRYMWDVADLHADNVr----------yKSNQSVATLEAVYHPFR 185 Aeromonas salmo...
EFP70868     137 ------seKNHDTGVSPVFAGGVEWAITPEIATRLEYQWTNNIGDAHTIGT------------RPDNGLLSLGVSYRFGQ 198
P02936       136 ------stKDHDTGVSPVFAGGIEYAITPEIATRLEYQWTNNIGDANTIGT------------RPDNGLLSVGVSYRFGQ 197 Salmonella ente...
WP_010944115 179 nktekvknRVYDVKPSLILGAGFEYAIIPELALRVEYQYLNRVGNLGKAIKkayktndmvgkySPDMHSVSAGLSYRFGQ 258 [Haemophilus] d...
P04845       144 ------rlSDHDTGVSPLAAVGVEYALTKNWATRLDYQFVSNIGDAGTVGA------------RPDNTMLSLGVSYRFGQ 205 Serratia marces...
P09146       136 ------agDNHDTGVSPVFAGGVEWAMTRDIATRLEYQWVNNIGDAGTVGV------------RPDNGMLSVGVSYRFGQ 197 Klebsiella aero...
1G90_A       173 GE 174 Escherichia coli
P45996       223 GE 224 Haemophilus influenzae
P43840       217 GA 218 Haemophilus influenzae Rd KW20
P38368       217 GA 218 Haemophilus influenzae
AAP95060     257 GG 258
AAF95357     172 SE 173
Q44299       179 TS 180 Aeromonas salmonicida
WP_005316809 186 SS 187 Aeromonas salmonicida
EFP70868     199 GE 200
P02936       198 QE 199 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
WP_010944115 259 GA 260 [Haemophilus] ducreyi
P04845       206 DD 207 Serratia marcescens
P09146       198 ED 199 Klebsiella aerogenes
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