Conserved Protein Domain Family
AUX_IAA

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pfam02309: AUX_IAA 
AUX/IAA family
Transcription of the AUX/IAA family of genes is rapidly induced by the plant hormone auxin. Some members of this family are longer and contain an N terminal DNA binding domain. The function of this region is uncertain.
Statistics
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Structure
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PubMed ReferencesClick to see Conserved Features Help

pfam02309 is the only member of the superfamily cl03528
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EFJ32574      19 ETELRLGPPkskepaknnvaageapkwqhekveqpkseksnepdlsggnvfwqaaarmipqevqapspaahqemshtayc 98 
XP_006654667  46 ELELKLGLP----------------------------------------------------------------------- 54 
XP_004969905  46 klELKLSLP----------------------------------------------------------------------- 54 
Q8LQ74        48 kLDLKLGLP----------------------------------------------------------------------- 56  Japanese rice
KQK09658      47 klELKLGLP----------------------------------------------------------------------- 55 
CDM83996      48 KLELKLGLP----------------------------------------------------------------------- 56 
XP_004954379  40 ddELELGLC----------------------------------------------------------------------- 48 
XP_006648119  33 eeELELGLS----------------------------------------------------------------------- 41 
XP_006355888  47 eTELELGL------------------------------------------------------------------------ 54 
XP_020159473  48 KLELKLGLP----------------------------------------------------------------------- 56  Aegilops tausch...
EFJ32574      99 nvastaamaanknkrvfseaigsngqfvegrsvmpnppgivvagspsnpGtgnggasssnpgvpVAPAPSQpsngkasat 178
XP_006654667  55 -------------------------------------------------Glhegeq--aagsreKIQQQ-Qqdgssap-- 80 
XP_004969905  55 -------------------------------------------------Glveeeta-tvsrheGIQRErpals------ 78 
Q8LQ74        57 -------------------------------------------------Gfieddea-etlrdyRLQQEspsls------ 80  Japanese rice
KQK09658      56 -------------------------------------------------Glaeeetp-atsrenMIHQErpals------ 79 
CDM83996      57 -------------------------------------------------GlveeepaassrennRVHQEspals------ 81 
XP_004954379  49 ----------------------------------------------------------------LGSKKQQqqqtpspap 64 
XP_006648119  42 ----------------------------------------------------------------LGSKKQQqqqhap--- 54 
XP_006355888  55 -------------------------------------------------GlslgasaaagdvipKSKTGSRgcyakiltp 85 
XP_020159473  57 -------------------------------------------------GlvqeepaassrekrV-HQEspals------ 80  Aegilops tausch...
EFJ32574     179 applmpSSMYpwnsskqlpaawrmgleqskssfgpfpsssrmapkmgdvdnnnsnsgspnssGLTSHNKEdateea---- 254
XP_006654667  81 spscfpAHSKaias---------------------------------------------ittTGAKRGSLasvgatpegy 115
XP_004969905  79 -lccfhEPSKpttn---------------------------------------------tttTGTKRVFLdtievktegc 112
Q8LQ74        81 -lsffpKHSKttss--------------------------------------------ttttTGAKRGFIdtvedktegy 115 Japanese rice
KQK09658      80 -lgylpLHSMttas---------------------------------------------tttTGAKRGFLdtveakaegy 113
CDM83996      82 -lgyppRHSTtit----------------------------------------------tttTGAKRGFLdtveakaqgy 114
XP_004954379  65 criltaRDLQpgalspdssvs--------------------------------ssspaagaaaaSKRAKAdaapnattsp 112
XP_006648119  55 criltaRDLQpaaaalspdss---------------------------------vsssspatgaSKRATAeegpgaatts 101
XP_006355888  86 kkdfssLGSNsssscssssa-----------------------------------ikannascgTKRTADsispp----- 125
XP_020159473  81 --lgyppKHSta-------------------------------------------------tTGAKRGFLdtveakaqgy 109 Aegilops tausch...
EFJ32574     255 ----------------------------------------------------------vpsaspPVVGWPPVQSFRKNLV 276
XP_006654667 116 nqihrdreecgneltlggenma-----------gerkkgcspsppshgsaavhssnpqgrgaipPVVGWPPIRSFRRNLT 184
XP_004969905 113 deqkqqaragcgnelaleqkivvv-------serkkgccpppshappaasvrnrpkaqgrgasaPVVGWPPIGSFRKNLa 185
Q8LQ74       116 ndqkqqaragcgkelaveemiaavs-----erkkgccpppppphgapatparnrpqtqgrgaaaPVVGWPPIRSFRRNLa 190 Japanese rice
KQK09658     114 neqkqqaraacgkeltveentaaase---rkkgccppppshappatparnngnrppargrgaavPVVGWPPIRSFRRNLa 190
CDM83996     115 ekeqkqqaraaacgkelaveentatvgerkkgccpppppphappatparnignrpqargrgaaaPVVGWPPIRSFRRNLa 194
XP_004954379 113 g----------------------------------------------------tvasghpqssfGVVGWPPIRTFRMNNL 140
XP_006648119 102 pg---------------------------------------------------tvasghphssfGVVGWPPIRQFRMNSL 130
XP_006355888 126 -----------------------------------------------------------rssvsQVVGWPPIRTYRMNTL 146
XP_020159473 110 ekeqaraaacgkelaveentaavger---kkgccpppppahappatparnignrpqargrgaaaPVVGWPPIRSFRRNLa 186 Aegilops tausch...
EFJ32574     277 -AHPPPPQhKStetttkngvssntsapaPAPAAANAat--------asPLFVKVYMDGVPIGRKVDLKANNSYDKLSTVL 347
XP_006654667 185 tNGSSSKQsPE-----------------QQ---NDEaddkak-lickkRPLVKINMDGIPIGRKVDLALYDSYQKLSSAV 243
XP_004969905 186 -NGSSSKQsTG-----------------SQ---KGEasmeek-ltcikNHLVKINMDGIPIGRKVNLAAYDSYERLSLAV 243
Q8LQ74       191 -SSSSSKHsPE-----------------PQ---NDNanakvt-ltckkNPLVKINMDGIPIGRKIDLAAYNSYDGLSSAV 248 Japanese rice
KQK09658     191 -TSTSSKQpPE-----------------QQ---NGEadakvk-lncnkSPLVKINMDGIPIGRKVDLAGCDSYERLSLAV 248
CDM83996     195 -STSASKQpPE-----------------PQ---IGEanakav-ldckkSPLVKINMDGIPIGRKVDLAACDSYERLSLAV 252
XP_004954379 141 -FNQAKENaSEagtkkaad-esgmqkdkESekk------------grvVGWVKVNMDGDIIGRKVDLNAHRSYKTLASAL 206
XP_006648119 131 -FNQPKENtSEadtkktntnesdvqkdkEEcekk-----------vrvAGWVKVNMDGEVIGRKVDLNAHRSYKTLALAL 198
XP_006355888 147 -VNQTKPPpPEefsvtnek--ckskntitNAGSSKInnfakekglvkaSLFVKVNLDGVTIGRKVDLNAHSSYENLARTL 223
XP_020159473 187 -STSASKQpPE-----------------PQ---IGEadakav-ldckkSPLVKINMDGIPIGRKVDLAACDSYERLSLAV 244 Aegilops tausch...
EFJ32574     348 EDMFLRFITGQ----NGTPEVSSIRdPGEKkLNFLQSS-DFVLTYEDKDGDLMLVGDVPWGMFTGTVKRLRIMKGSEAIG 422
XP_006654667 244 EELFRGFLEaqkdlsCAE-SGEQGT-EEKIfSGLLDGTgEYTLVYEDNDGDRMLAGDIPWNVFVSTAKRLRVMRRSELph 321
XP_004969905 244 KELFQGFLAaqknlsSAE-NAQLGA-DEKIfSQLLNGSgEYTLVYEDNEGDKMLVGDVPWNVFVSTAKRLRVLRSSELSH 321
Q8LQ74       249 KQLFHGFLQaqkdqtNAQ-IAQQGA-DDKIfYQLLDGSgEYTLVYEDSEGDRMLVGDVPWKVFVSTAKRLRVLRSSELsh 326 Japanese rice
KQK09658     249 KELFHGFLEaqrepsSAE-SAQQGA-DRKIfSQLLDGSgEYTLVYEDNEGDRMLVGDVPWNVFVSTAKRLRVLRSSELSr 326
CDM83996     253 KDLFHGFLQvqrdpsKVE-RTQQGA-DENIfSRLLDGSgEYTLVYEDSEGDRMLVGDVPWNVFVSTAKRLRVLRSSELsh 330
XP_004954379 207 ELMFMKPSIGLct------------sSSAKsLNLLDSSsEYQLTYEDRDGDWMLVGDVPWEMFVGSVKRLKIMRTSDANn 274
XP_006648119 199 ELMFTKPSIGLct------------sHNTKsLKLLDNSaEYQLTYEDRDGDWMLVGDVPWEMFVGSVKRLRIMRTSDANG 266
XP_006355888 224 DNMFLRPSTTVcarsSNAQELGVMS-ETAFsSRLLDGSsEFVLTYEDKEGDWMLVGDVPWEMFISSVKRLRIMRTSDANG 302
XP_020159473 245 KDLFHGFLQvqrdpsKVE-RTQQGA-DEKIfSQLLDGSgEYTLVYEDGEGDRMLVGDVPWNVFVSTAKRLRVLRSSELsh 322 Aegilops tausch...
EFJ32574     423 LAPR 426
XP_006654667 322 dmqk 325
XP_004969905 322 GLig 325
Q8LQ74       327 tlig 330 Japanese rice
KQK09658     327 alig 330
CDM83996     331 glig 334
XP_004954379 275 glgp 278
XP_006648119 267 LGQR 270
XP_006355888 303 LGTs 306
XP_020159473 323 glig 326 Aegilops tauschii subsp. tauschii
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