3JB9


Conserved Protein Domain Family
EFTUD2

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pfam16004: EFTUD2 
116 kDa U5 small nuclear ribonucleoprotein component N-terminus
Statistics
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PSSM-Id: 464968
Aligned: 125 rows
Threshold Bit Score: 69.0998
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3JB9_B          5 DLYDEFGNYI--------------GpENEEDeEElfpqapsptiaqvpsfeevip------------------deeledv 52   Schizosacchar...
Q5CU80          5 DVYDEFGNYIvkddndsegsadwvGsEETSDpEDshnnkdgeifdhaqkeesedsgsdifsenewqkhkgqvkilnkqsi 84   Cryptosporidi...
XP_002142411    5 EIYDEFGNYI--------------GtESESN-LDleisldededqssdsqknpthdpt------------evddvkming 57  
CCE84442        4 DLYDEFGNPI--------------GgQDDEQfDSessnasnlahsddea------------------------------s 39  
XP_001485790    4 DDYDEFGNLI--------------GdPLDSD-ADsssdaesishidsrdhsgenp------------------lnsvpid 50  
EFA79966       36 gvdddeGNDLt-------------GiDMSRDdADrdndedhdhhsnglng---------------------------ngr 75  
Q54R72          4 NLYDEFGNYI--------------GeSL-ED-EEvtydqqqqqqeeeeeedrkpnqqqqqqqynddeahieetgdndggd 67   Dictyostelium...
EGC33460        6 ELWDEFGNYI--------------GpDLDEN-EDqlyeieqqaqqeqeedhketngynqd-------ephieetndddee 63  
EGG17824        5 PIFDEFGNLI-------------------EDvEDienideqqdydddeeervardeqqnght---taadgdgdepmvqee 62  
A0BVQ2          5 NNYDEFGNYI--------------GpEIDSEeEDnvqieeeqmaendq-------------------------------- 38   Paramecium te...
3JB9_B         53 eraeemalshlepQNAVVLHED--KQYY-----PSAEE------VYGSNVDIMVQEQDTQPLSQPIIEPIRHKRIAIETT 119  Schizosacchar...
Q5CU80         85 kdedhemtqetddDNKIVQFED--KEYY-----PDPSD------VYGDDVEILVQEEDHQHIDEPLISPLKENKFDLIEK 151  Cryptosporidi...
XP_002142411   58 inrivdgmdiemdNEAIILHEH--KEYY-----EDADK------IFGKDVEILFEDEDMHHIDTPTIVPLKDNKFDLVEG 124 
CCE84442       40 esgvddemrndeaETNLVLHADagKEHTiedvdADSHKalslktVYGKGVETIVASEDVPMEDEPVIKPLTETKMKVEYT 119 
XP_001485790   51 kdaktaslrdndnSMAITRNEG--KQVG-----LKS--------TFGPEVETIIVKPTMEQKDEPVILPDIQKKLRLVld 115 
EFA79966       76 qqndrmevdnelkSNAIVLHED--KKYF-----PDASE------VY-HGAEVMVQDEDTQPISKPIIAPTRTRTFALTEQ 141 
Q54R72         68 emnidrdniqistTSAIVLHED--KQYF-----PDASD------VY-KGVEVMVQDEDSQPLSKPIIDPKKNKSFTITEK 133  Dictyostelium...
EGC33460       64 rmnldnnirqvttSSAIVLHED--KQYY-----PDAND------VY-KGVEVMVQDEDTQPLSKPIINPQKNKTVSIQEK 129 
EGG17824       63 eedshvefktrqpGNAIVLHED--KQYY-----PDASE------VYGQDVEVMVQDEDTQPISKPVIDPGSKRSFLVADK 129 
A0BVQ2         39 ehvianrvyipnqQVAVILNED--KQYY-----PDAQQ------VYGRDVEINVQEEDAQPITQPMIAPLKSKEFDIQET 105  Paramecium te...
3JB9_B        120 NVP 122  Schizosaccharomyces pombe 972h-
Q5CU80        152 NLK 154  Cryptosporidium parvum
XP_002142411  125 DIn 127 
CCE84442      120 DFE 122 
XP_001485790  116 esl 118 
EFA79966      142 DLP 144 
Q54R72        134 DYP 136  Dictyostelium discoideum AX4
EGC33460      130 DYP 132 
EGG17824      130 ELP 132 
A0BVQ2        106 QIP 108  Paramecium tetraurelia
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