Conserved Protein Domain Family
Vps16_C

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pfam04840: Vps16_C 
Vps16, C-terminal region
This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport. The role of VPS16 in this complex is not known.
Statistics
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PSSM-Id: 282668
Aligned: 4 rows
Threshold Bit Score: 485.105
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9UT38 513 ISYEKIARTAYQEGRLILSTKLLDFEPLAKHQVMLLLNMEAYEQALKKVIETMDNNLIIYVVLQIKQQMAIASFFQILNE 592 Schizosaccharomyces p...
Q920Q4 517 VSYSDIAARAYGCGRTELAIKLLEYEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHLKNELNRGDFFMTLRN 596 house mouse
Q9VHG1 515 ISFCNIASKAHQAGRDDLAIKLLELESRASLHVPLLLKMRKFDRAVGSATQSGDTELITQVLLEMKMHMMLSNLHMTIRD 594 fruit fly
Q03308 478 LQMVAVAKVAYLEGRFQLSRNLALLEKNEEARIEQLYNLDDDSIALKECIKVQNYSLTISLLIALSKKLTNSQLTKLLII 557 Saccharomyces cerevis...
Q9UT38 593 YPDAVKVYVEFAKKNDRKTLHDFFYQDDNKQGIAVLAVEDTLk-tATVNQRITSLKSAAKVCSESKElSLEEKCLGDEI- 670 Schizosaccharomyces p...
Q920Q4 597 QPMALSLYRQFCKHQELDTLKDLYNQDDNHQELGSFHIRASYaaeERIEGRVAALQTAADAFYKAKN-EFAAKATEDQM- 674 house mouse
Q9VHG1 595 HPLALNIYKKIMRESNRAGLYGIYNTEDDQKAIAEYHFQNAI----ETEGLESNLSMIGNAYAQGRC-TLEAELCADTS- 668 fruit fly
Q03308 558 DMFNNPLYLYYMR-MDKAYLYDFYRQTDRFIDLAHVLLQQG----KEQQSLHSFLPQIKDLYSQVQNsEVVNNTIE-QLq 631 Saccharomyces cerevis...
Q9UT38 671 ---KLLQLQQTYEDQFTGNFVGLTVNEVVVKLIQINQTQRANKLRSDFQIPEKRFAWLKLRALVAIRDWVQIEQWAGSmR 747 Schizosaccharomyces p...
Q920Q4 675 ---RLLRIQRRLEDELGGRFLDLSLHDTVTTLILGGHNKRAEQLARDFRIPDKRLWWLKLAALADLEDWEELEKFSKS-K 750 house mouse
Q9VHG1 669 ---RLIKLQKTLSTKYNVSLNGLSIHETIQELLLIGELKEAERIRSEFKVPDRRFWWLRILTLSSQHKWEELEKLAKS-K 744 fruit fly
Q03308 632 rqeKLWIYQESLGKRFAISFTNMTLDQTLSKLIETGQDKQVKEIVKKFKISEKKLYHLKCKTLVEAKKFDELLQFAQS-R 710 Saccharomyces cerevis...
Q9UT38 748 RSPIGFEPFVTEILSAGNKKEAAKYIPRctqLTTQEKVDMWVQVGDVKSASEEAAKSKSGSVLGDLLERVQTMPESRF-- 825 Schizosaccharomyces p...
Q920Q4 751 KSPIGYLPFVEICMKQHNKHEAKKYASR---VGPEQKVKALLLVGDVAQAAEVAIEHRNETELSLVLSHCTGATDGAIad 827 house mouse
Q9VHG1 745 KSPIGYDPFVEVCLKQDNVMEARKYIPR---CRDNRRVVWYMRANLFNEAIDSAFEQRDVHSLFELQKNQAIVNNGTLls 821 fruit fly
Q03308 711 KSPIGYMPFYTYLKSRGHMDKASPYVNMipgLSyQEKKKLYVECRGFRDAIQLAGKEKDIPGLKEIYNIIPPNEPELKal 790 Saccharomyces cerevis...
Q9UT38 826 -VQNALDQ 832 Schizosaccharomyces pombe 972h-
Q920Q4 828 kIQRARAQ 835 house mouse
Q9VHG1 822 kVCDCIAM 829 fruit fly
Q03308 791 aNETMSRI 798 Saccharomyces cerevisiae S288C
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