Conserved Protein Domain Family
RING-H2_RNF121-like

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cd16475: RING-H2_RNF121-like 
RING finger, H2 subclass, found in RING finger proteins RNF121, RNF175 and similar proteins
This subfamily includes RNF121, RNF175 and similar proteins. RNF121 is an E3-ubiquitin ligase present in the endoplasmic reticulum (ER) and cis-Golgi compartments. It is a novel regulator of apoptosis. It also facilitates the degradation and membrane localization of voltage-gated sodium (NaV) channels, and thus plays a role in the quality control of NaV channels during their synthesis and subsequent transport to the membrane. Moreover, RNF121 acts as a broad regulator of nuclear factor kappaB (NF-kappaB) signaling since its silencing also dampens NF-kappaB activation following stimulation of toll-like receptors (TLRs), nod-like receptors (NLRs), RIG-I-like Receptors (RLRs) or after DNA damage. RNF121 contains five conserved transmembrane (TM) domains and a C3H2C2-type RING-H2 finger. RNF175 is an uncharacterized RING finger protein that shows high sequence similarity with RNF121. This family also includes Arabidopsis RING finger E3 ligase RHA2A, RHA2B, and their homologs. RHA2A is a positive regulator of abscisic acid (ABA) signaling during seed germination and early seedling development. RHA2B may play a role in the ubiquitin-dependent proteolysis pathway that respond to proteasome inhibition. All subfamily members contain a C3H2C3-type RING-H2 finger, which is responsible for E3-ubiquitin ligase activity.
Statistics
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PSSM-Id: 438138
Aligned: 27 rows
Threshold Bit Score: 84.2678
Created: 2-May-2013
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
Zn binding site
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C H H C C CClick to see conserved feature residue pattern help
Evidence:
  • Comment:based on the structures of other RING-H2 fingers with bound zinc
  • Comment:C3H2C3-type RING-H2 finger consensus motif: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-H-X2-C-X(4-48)-C-X2-C, where X is any amino acid and the number of X residues varies in different fingers
  • Comment:A RING finger typically binds two zinc atoms, with its Cys and/or His side chains in a unique "cross-brace" arrangement.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          #  #                                                     # #  #  #            
Q9H920       224 SVCAVCGQqifvdv--------------------------------seegiiENTYRLSCNHVFHEFCIRGWCIvGKKQT 271 human
Q09251       294 GVCAVCGGrlddsehvhdad--------------------avvttkmvededEKLYKLSCGHVFHEFCIRGWVVvGKLQT 353 Caenorhabditis ...
CBY30697     174 DTCGVCGEtnigcd---------------------------------engvpEKQHTLPCGHSFHDYCIRGWVIvGKKQI 220 Oikopleura dioica
EDQ85429     289 DVCAVCGDslrel-----------------------------------edvgEKRATLPCGHVMHDFCIRGWCIiGKKQT 333 Monosiga brevic...
EKX44945     105 TVCLLCGDalnynwalmnss--------------------iqsqrinatetaERTVNLSCGHSFHDFCIRGWTIiGKKDI 164 Guillardia thet...
EFN56031     209 RSCGICGGdlndgggtpaaa---------------------eaaggggggtgLGTIQLSCKHLFHMECIRGWCIiGKKDT 267 Chlorella varia...
XP_004343440 221 NMCGICTEslppv----------------------------------gspdeTRVVKLECQHHFHEFCIRGWCIvGKKQT 266 Capsaspora owcz...
EFC48740     211 HVCGICNQelkndtnldfegggsaadfesssdqpftrritgdaaqeskrktiQETKVLSCQHKFHEFCLYGWLIlGKKDS 290 Naegleria grube...
AGE96407     238 SLCMICTKsfd---------------------------------------rtVKIHTLVCSHSFHEDCIKGWCLlGKKPF 278 Encephalitozoon...
CEO94280     174 RICALCDQeldlssp-------------------------------lsasgqRNVHVLACGHRYHDLCLRGWAMvGKKDT 222 Plasmodiophora ...
Feature 1        #  #   
Q9H920       272 CPYCKEK 278 human
Q09251       354 CPYCKER 360 Caenorhabditis elegans
CBY30697     221 CPVCKEK 227 Oikopleura dioica
EDQ85429     334 CPYCKEK 340 Monosiga brevicollis MX1
EKX44945     165 CPFCSEK 171 Guillardia theta CCMP2712
EFN56031     268 CPTCWEK 274 Chlorella variabilis
XP_004343440 267 CPYCKEK 273 Capsaspora owczarzaki ATCC 30864
EFC48740     291 CPICKEV 297 Naegleria gruberi strain NEG-M
AGE96407     279 CPYCKKR 285 Encephalitozoon cuniculi
CEO94280     223 CAYCREK 229 Plasmodiophora brassicae

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