Conserved Protein Domain Family
transpos_IS4_1

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NF033592: transpos_IS4_1 
IS4 family transposase
Statistics
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PSSM-Id: 468101
Aligned: 120 rows
Threshold Bit Score: -1
Created: 24-Apr-2023
Updated: 3-May-2023
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_040351662  18 MLRQVFP-LLAKLSASgTERDKAGnRRL-LFSQYASLILVGLFnpALESARAIVAASGVKKIakltgg--kkvadGSFSE 93  Blastopirellula...
WP_049912812  31 LYSLLAAgDSESIAQE-FDIGIHT-DKHdFDNHLKVAIREGLD--PSSSLAELADKTAVDDSldk-------mpeSRFSE 99  Halococcus thai...
WP_014555129  31 LYSLLDEvDSESIADE-FKIGLHS-DKHdFTNHVKTVVREGLD--PSSSLAELEDKTIVDDSleh-------mpkSRFSE 99  Haloquadratum w...
WP_076612256  13 ILKGLPKnDYPVLNSR-------------LFFEFWLSYVLDNS---LTSMRGLFARLNNTGFel---------diSTFSK 67  Trichormus vari...
WP_011140874  12 ALSSLPNdDFPVLDSR-------------LFFSCWLALVMDKS---TVSMRDLFKRVNHTGIpv---------diSTFSK 66  Gloeobacter vio...
WP_011140763  12 FLSALPDrDFPVLDSR-------------LFFSCWLALIMDKS---TVSMQDLFKRLNRTGIpv---------diSTFSK 66  Gloeobacter vio...
WP_086558357  11 MQKLVSDeEIQLIAEA-VGYRDSS-RTFtLRELIHFFLLAAMH--QWKSFRHGADVGPLYGLprf--------hySTVSK 78  Geobacillus
WP_009960198  16 LCKLIPGhLVANLCAQ-HHHGSQP-RTFsSWSHVVSLLYAQLT--HSISLNDVCDSLRHHAGalaairgatpparNTLSH 91  Verrucomicrobiu...
WP_076611068  14 LLKPISRhEFESLASE-HHSGQKL-RSAtRWDQFTAMAMAQLS--GRQSLRDIETNLLAQQDklyhlg-akpiarSTLAR 88  Oceanobacter
WP_010940926  11 VVGFFKRhEFESLARK-HHIGQKF-RSFnRWSQFMAMMVCQLS--GRKSLRDIVENLKAQGHklyhlg-mktvsrTTLAR 85  Geobacter sulfu...
WP_040351662  94 ASSIFDPRLLEGIIKDLRSRWhqq-----rmsSEPRSGRASdrtveRLIAVDGSVLTALPQIVGRIAAKEK--------- 159 Blastopirellula...
WP_049912812 100 LTNDRDYRAVVRMLFALLHTPqlyhq--ravqRKRLKWLTR-----GVIAVDATNLELTRSVVVSDEFVGDdehvyeidt 172 Halococcus thai...
WP_014555129 100 LTNDRDYRAVVRLLFELLHTPqlyhq--rgvqRKRLGWMTR-----GVVAVDATNLELTRSVVVSDEFVGDdediyeidt 172 Haloquadratum w...
WP_076612256  68 ANLHRSQKPFQEIYQKLNKLVqn--------kAENKLHNKY-----AICPIDSTVITLTSKLL-WVLGHHQ--------- 124 Trichormus vari...
WP_011140874  67 ACKSRSLQIFEQLYQALLVRVrr-------elPAKKL---------HPCPIDSTVVGLTSKLLWAqd------------- 117 Gloeobacter vio...
WP_011140763  67 ACKSRSLQMFEQLYRDLLARVrr-------elPVKQL---------HPCPIDSTVVGLTSKLLWAqs------------- 117 Gloeobacter vio...
WP_086558357  79 KAKEVPYDIMKRLLALIISKCnr--------qTRRSLRFPK-----PLRVVDSTTVTVGKNRLPWAPYHGEr-------- 137 Geobacillus
WP_009960198  92 ANKNRDSDLMETLFWKMLDHLqhrhpgfglryEGLPRRFRR-----AIYAIDSSTIALVANCMSWAKHRQRk-------- 158 Verrucomicrobiu...
WP_076611068  89 INEKQPAELYQSLFYKLLGKTqn-------cpSNHKFRFKN-----PLYSLDASAIDLSLNICPWAEHRDDt-------- 148 Oceanobacter
WP_010940926  86 VNDEQPHELYKELFYKMLHRCka-------vaPSHRFKIDE-----KVYLLDATTINLCLEAFPWATYRQKk-------- 145 Geobacter sulfu...
WP_040351662 160 --GQWRFHAL--VHVLDGQPVASKLTEEPsakgRAERDVLAEMIAAdqiDIPqsdeGH-LFLMDRGYRSAELFNKIHTAG 234 Blastopirellula...
WP_049912812 173 ddGGLELHCAarVDGEHKHPLGTTVTEGE----THESPQFDHLSDD---VEVfadlDSvIWVFDRGYTRYRRFCEIKYSD 245 Halococcus thai...
WP_014555129 173 dgGGVELHCAarVDGKHKHPLGATVTEGD----THESPQFDLLEDD---VEVfadlDSvIWTFDRAYTRYLRFCEIKHSD 245 Haloquadratum w...
WP_076612256 125 ----VKLFSS--LNLATGSPEDNLINFGH----DHDYKFGSKMIAN---LPT----NA-VGVMDRGFAGLKFIQELVQEN 186 Trichormus vari...
WP_011140874 118 -yHQVKLLTC--LEHGSGATEGSLINFGY----DHDSNFVNDMLEA---IPE----NG-VGIFDRGFAGLEYLKNAQASS 182 Gloeobacter vio...
WP_011140763 118 -yHQVKLLAC--LEHGSGATEGSLINFGY----DHDSNFVNEMLQA---IPE----NG-VGIFDRGFAGLEYLKNAQASS 182 Gloeobacter vio...
WP_086558357 138 --AGVKLHVA--YSPEFSLPADVVETTGL----RHDGPVGEQLTNA----------QQ-VLVEDRAYFKIERLDRFVEQH 198 Geobacillus
WP_009960198 159 --AAAKLHLR--LNLQTFLPAFAIIEEAS----HHDDSRSRALCAS---LKD----GE-IALFDKAYINFAHLWELTGRG 222 Verrucomicrobiu...
WP_076611068 149 --SNVKLSVA--LNNGSQIPEFVAISDGN----ENDMIEGRKFD-----FPA----GS-MVALDKGYIDYEWFGDLTNKG 210 Oceanobacter
WP_010940926 146 --GAIKMHVG--LDADGYLPEFIDVTEGK----KHEMSWARMLQ-----LPA----GS-LAVFDRGFTDYDWWQQLTTNG 207 Geobacter sulfu...
WP_040351662 235 HDYICRLnrTDGKLLKPPKKGEvrepiqlpplsaEAIAMGIVA--DELITMGGNCGASKIGSDHP-MRRIKLIppadrpS 311 Blastopirellula...
WP_049912812 246 DDFVTLLq-SNARLDVLDTLQ-----------------NVEVT--NEDGTRQIRDEQIELAETGEqFRRIVLE------T 299 Halococcus thai...
WP_014555129 246 NDFVTLMy-SDARFELIETLEEfev-------siTPERGAQPRdsADESTRQVRDERIELAETGEeFRRIVLN------A 311 Haloquadratum w...
WP_076612256 187 KYFVLRI-------------------------------KNNWK--LEFEESSGLIKVGASDDAQA-YRVINFC------D 226 Trichormus vari...
WP_011140874 183 KYFLMRI-------------------------------PSNYK--LTFEGNAGQMRVGTGKESGV-YRVVNFC------D 222 Gloeobacter vio...
WP_011140763 183 KYFLMRI-------------------------------PSNYK--FTFEGNAGQMRVGTGKESGM-YRVVNFC------D 222 Gloeobacter vio...
WP_086558357 199 QLFVIRMk-DNIELHQKKS---------------LNRLSSTSS--SVQTDFTCQLGTKQCRSTKR-HRVVIFR------D 253 Geobacillus
WP_009960198 223 IFWVTRAk-DNMSYRVTRKLQ-------------ARPQGKVLR--DDLIVLKGARSLSQHPGP---LRRVEMLv-----E 278 Verrucomicrobiu...
WP_076611068 211 VSFVTRLr-SGSVFSVLEHLG-------------SNPDQGILS--DERIELTSVHAKKRSEPE---LRLVHYI------D 265 Oceanobacter
WP_010940926 208 IFFVTRLk-ENALVEYFKKRP-------------GRKATGVIL--DQEIRLKGMKDK---------LRLVQFI------A 256 Geobacter sulfu...
WP_040351662 312 SARQgrvrtdqtgrdELVLATTLm--D---LTAEEIVRLYEHRWEVELFFRFLKQVLGCKKLLSAKTAGVQIQLYCAIIA 386 Blastopirellula...
WP_049912812 300 PDGE-----------ELQYLTTL---AssaYDPIDVISIYTLRTMIEILFREFKQYLNVENFHSKSLNGVLFELFCALIG 365 Halococcus thai...
WP_014555129 312 PDGE-----------EIEYLTTLa--Ss-aYDPIDVISIYTLRTCIEILFRELKQYLNIENFHSKSLNGVLFELFCALIG 377 Haloquadratum w...
WP_076612256 227 LETKt----------EFRLVTNLpadGeatVSDDDIRDIYLLRWGVELLWKFLKMHLKLDKLITKNVNGITIQIYVSLIA 296 Trichormus vari...
WP_011140874 223 IENRa----------EYRLVTNLpaeGewlVRDEEVMELYRQRWQIELLWKFLKMHLKLKRLMTKNENGIRMQLYITLIA 292 Gloeobacter vio...
WP_011140763 223 IENRa----------EYRLVTNLpaeGecfVSDEEVMELYRQRWQIELLWKFLKMHLKLKRLMTKNENGIRMQLYVTLIA 292 Gloeobacter vio...
WP_086558357 254 ANGR-----------DIRVVTNLf--H---ASAETIADMYQQRWAVEVFFRWVKQYLNVPTLFGTTENAVYNQLFAAFIA 317 Geobacillus
WP_009960198 279 LDGKe---------vRMAFITNQt--E---WAASTVGELYQSRWGIEVFFKQIKQTLCICDFLGHSKNAIRWQLWAALLL 344 Verrucomicrobiu...
WP_076611068 266 QESGq----------LYHFVTNNf--Q---LSARTIAAIYKDRWQVELFFKAIKQTLKIKNFAGYSKNAVLTQIWIAMII 330 Oceanobacter
WP_010940926 257 DDGN-----------DYRFVTNAh-----hLKAAIVADLYKERWKIELFFKWIKQNLKIKTFLGTSENAVLTQIWIALCV 320 Geobacter sulfu...
WP_040351662 387 SLLLALTT 394 Blastopirellula marina
WP_049912812 366 YVLVEWLR 373 Halococcus thailandensis
WP_014555129 378 YVLVEWFR 385 Haloquadratum walsbyi
WP_076612256 297 YLILQLVS 304 Trichormus variabilis
WP_011140874 293 HLLLELVS 300 Gloeobacter violaceus
WP_011140763 293 HLLLELVA 300 Gloeobacter violaceus
WP_086558357 318 YVLLRWLY 325 Geobacillus
WP_009960198 345 YVLLRFLA 352 Verrucomicrobium spinosum
WP_076611068 331 YLLVSISK 338 Oceanobacter
WP_010940926 321 YLVLAYLT 328 Geobacter sulfurreducens
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