Conserved Protein Domain Family
Ge1_WD40

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pfam16529: Ge1_WD40 
WD40 region of Ge1, enhancer of mRNA-decapping protein
Ge1_WD40 is the N-terminal region of Ge-1 or enhancer of mRNA-decapping proteins. WD40-repeat regions are involved in protein-protein interactions.
Statistics
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PSSM-Id: 465162
Aligned: 5 rows
Threshold Bit Score: 551.676
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EKC36611      187 GSNKVKTTPVVKFEWEPVY-YIGNLVTLHRLNVYAAYSLRGKs-----GGVVRIINRKTAERALLKDLTGKVVDIAFAYT 260 
EFN83696       48 GSSKVKLKNIVDFTWEHHL-YTGQLLAVHVSGKYLAYGIKVGt----gGGLVRVVHKELEHRVLLRGMRGAIQDLAFAHV 122 
Q9VKK1        119 GSSKVKLKNIVDYKWERKYyYPGHLVAVHRDGKHLAYAINVNnkatgmEGMVRVCNIATSMRALIKGMSGEVLDLQFAHT 198  fruit fly
XP_008200200   46 GSSKVKLINRIDYNWEFHY-YRGQLVAVHINGKIIAYGMKGKd-----GGMIRVTNQETNERALIKNLKNDVKDLSFAFS 119 
XP_011288403  115 GSNKVKIQPVAKYDWEQKY-YYGNLIAVSN--SFLAYAIRAAnn---gSAMVRVISVSTSERTLLKGFTGSVADLAFAHL 188 
EKC36611      261 DDVILA-AVDEVGNLLVHSVREGDdKKIQVQLLLKI-TRprGTIPTEYHRVIWCPFIPDDcdDSsvteSSTQDASRVLVL 338 
EFN83696      123 SNVVLA-CIDHSGSLFIYTIEPTQ-SELLCSLVIQV-DA--EDVPSISHRVIWCPYIPED--DA----SDGDEVSKLLVL 191 
Q9VKK1        199 DCERIL-AVIDVSSLFVYKVDQIE-GNLLCNLVLKV-EDpiANYVPEYDMVSWCPYVCSS--SAtvpiNDDDDENQLLIW 273  fruit fly
XP_008200200  120 RQQIILgCIDDEGNVFIYEIIDEP-SAIKYKQLLHIfHSdvVPHSSPNFRIIWCPYLTCF--DEe--eETPDDPEKMFVV 194 
XP_011288403  189 NSSQLA-CLDEAGNLFVWRLALVN-GKIQEEILVHI-QQpeGTPLNHFRRIIWCPFIPEE--SEd----cCEEGSPTVAL 259 
EKC36611      339 THGEKSEIWNVDMVTREHGSGPLSVDDVEF--GLIRIDSHT-KaslqqiahaVMDAAFSPDGTALATASLDGEVKFFQVN 415 
EFN83696      192 TRGSKVELWSIATVASKFRSIDATNAAAKDcgGMIEIEQHSgT---------IVEATFSPDGTALATASTDGEVKFFQVF 262 
Q9VKK1        274 SRSSQFQCFQVKMIVSEHGRGKIQPAALES--GYLKIEEDS-L---------ITCAALSPDGTTVAAACADGLVRFYQIY 341  fruit fly
XP_008200200  195 LNWDKAEIWNFGMINAKYGPGPLQPNENYE--GYVEISHTA-E---------LVDASFSSDGTAIAIACLDGYVKFFQIY 262 
XP_011288403  260 LHEDRAEVWDLDMLRSNHSTWPVRVSQIKQ--GFIVVKGHStC---------LSEGALSPDGTVLATASHDGFVKFWQIY 328 
EKC36611      416 MSES-----TSPRCLHQWKPHDGKPLSSLFFLDDHRN-SsADTQFWRFAVTGACNNQEIKIWSCESWVCLQTLRFMCPpd 489 
EFN83696      263 LHNNshngqPQPRCLHQWRPHAGRPISCLFFLDDHKNyH-PDVQFWRFAVTGCDNNSELKVWSCEVWSCLQTIKFAPT-- 339 
Q9VKK1        342 LFDV-----RNHRCLHEWKPHDGKKVCSLFFLDNINK-P-VEESYWQHVITTSDANTEIKLWNCSLWKCLQTINVVAS-- 412  fruit fly
XP_008200200  263 MVDN-----EKQKCLHEWRPHDGKPLSSIIFVDNLLE-C-S-SQCWKFTITGANHNSELKLWSCETWTCLQTIHFKPDp- 333 
XP_011288403  329 IEGQ-----DEPRCLHEWKPHDGRSLSCLLFCDNHKK-QdPEVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDi- 401 
EKC36611      490 lPTNFS-AEpCMKAGLDLSAKYLVLSDIKRQVLYVLQIHQDSA 531 
EFN83696      340 -PTTGK-LP-VLKAGLDLSAGYLLLSDIYNKVLYILSLSKDRG 379 
Q9VKK1        413 -PSSLQ-PR-NFIAGIDRSANYLVLSCLDSLAVYVMQIGSTGG 452  fruit fly
XP_008200200  334 -SNLIQ-SV-YLKMSIDYSGQYLLMSDLNNKVLYVLQLKRSDE 373 
XP_011288403  402 -FSSVSvPP-SLKVCLDLSAEYLILSDVQRKVLYVMELLQNQE 442 
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