Conserved Protein Domain Family
Ly49

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pfam08391: Ly49 
Ly49-like protein, N-terminal region
The sequences making up this family are annotated as, or are similar to, Ly49 receptors. These are type II transmembrane receptors expressed by mouse natural killer (NK) cells. They are classified as being activating (e.g.Ly49D and H) or inhibitory (e.g. Ly49A and G), depending on their effect on NK cell function. They are members of the C-type lectin receptor superfamily, and in fact in many family members this region is found immediately N-terminal to a lectin C-type domain (pfam00059).
Statistics
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PSSM-Id: 462461
Aligned: 21 rows
Threshold Bit Score: 126.317
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_008509527  41 SVPWHPFVVTLGILCLLLLVTVTVLGTMIFQCFKEKHQQEEILrKLIPQYDSIRNNNYSKEQLLINKTLECDILKNktlh 120
XP_017447978  40 SVPWKLIVIALGILCSVLLVTVAVLVTNCLQYNHETHELQETQ-NSQHNCSTMENDIKLKEEMLRNMSIESTRYNA---- 114
NP_001002986  40 PVPRHLIVVILGILCLLLLIIVAVLGTKIFQFIQENHHLGEMIgNLTQEYHILQNDSYLKDQLLTNKSLEYNILKN---- 115
XP_004052762  41 SVPWRLIAVTLGILCLLLLMIVTVLVTNIFQCIQEKHQQQEILrNCSEKY-IMQNDNYLKEQILTNKTLKYDVLKNdsfq 119
XP_008509527  41 SVPWHPFVVTLGILCLLLLVTVTVLGTMIFQCFKEKHQQEEILrKLIPQYDSIRNNNYSKEQLLINKTLECDILKNktlh 120
Q75XR1        41 SVPWHLLVVTLGILCLLLLVTVIVLGTNIFKRIQEKPQQEEIPqNFSQKYNIIQKDNYLKEQLLTNKTLEYDILKNenlq 120 horse
XP_020946832  41 SVLWHRIAVILGILCFLLLVTVIVLGTKTFQYIQEKHQQEEILrNLTQKYHLMQNENYLNEQLLTNKTLEYSILY----- 115
Q8SPQ6        41 SVPWHGIAVTLGILCLLLLMTITVLGIKISQYILEKHQQEEALwNLSQKYDVVQNDNYLNKQLLTKKTSECDRLNEtlqq 120 cattle
Q5MPW8        48 SVTWKPIVIVLGILCSLLLVTVAVLLTHIFQSRQEKHEHEQRLnNLDQLYHVMKNDSSLMEERLRNKSLEFETCKN---- 123 Norway rat
Q60660        40 SVPWKFIVIVLGILCFLLLLTVAVLVIHIFRDGQEKHEQEKTLnNLRQEYQVMKNDSSLMEEMLRNKSSECKALND---- 115 house mouse
XP_008509527 121 qkkELDSLFMEKMRCHIKQEIFSKSLQSTGKFNEdHWSCCGVNCYYF 167
XP_017447978 115 ---LLDLINREQKRWYNKTKTVLAAPQHTGGCVEmHWLCYGIKCYYF 158
NP_001002986 116 ---EMLQQKKEQDLLFTN-RTF--QSKNKGKLHEnHQSCHRIKYYYF 156
XP_004052762 120 qkkELDSHLIQKNRCHRENEIVFKVLQNTGKFSEdHWSCCGVNCYYF 166
XP_008509527 121 qkkELDSLFMEKMRCHIKQEIFSKSLQSTGKFNEdHWSCCGVNCYYF 167
Q75XR1       121 lkkDLESLSKAKMSCHRKQGIFSKSLQNTGKLNEdRWSCCGVNCYYF 167 horse
XP_020946832 116 ---------NQRKGCCRKMDVFSKPLQNTGHLNEgHLSCWRGNFYYF 153
Q8SPQ6       121 ikgLSDLVFTEKKGCYHKKKS-SESLPNTGELKEvSWWCWGVNCYYF 166 cattle
Q5MPW8       124 ---TLDNLNREQNRCYRESKIDLKCFKYKGKQVEgHWFCCGMKCYYF 167 Norway rat
Q60660       116 ---SLHYLNREQNRCLRKTKIVLDCSQNKGKQVEgYWFCCGMKCYYF 159 house mouse
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