Conserved Protein Domain Family
7tmA_OR8D-like

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cd15406: 7tmA_OR8D-like 
olfactory receptor subfamily 8D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors
This group includes human olfactory receptor subfamily 8D and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.
Statistics
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PSSM-Id: 320528
Aligned: 15 rows
Threshold Bit Score: 470.697
Created: 17-Jan-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
  next features
Feature 1:putative ligand binding pocket [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                         #  ##          
Q8WZ84        16 GLTQQAELQLPLFLLFLGIYVVTVVGNLGMILLIAVSPLLHTPMYYFLSSLSFVDFCYSSVITPKMLVNFLgkKNTILYs 95  human
NP_001000791  16 GLTDKPELQIPLFSLFLLIYVVSMAGNLGLVFLIRISSQLHTPMYYFLSNLSFIDFCYSSVIIPKMLVNFVseKNFTSFp 95  Norway rat
Q15617        16 GLSEQPELQLPLFLLFLGIYVVTVVGNLGMTTLIWLSSHLHTPMYYFLSSLSFIDFCHSTVITPKMLVNFVteKNIISYp 95  human
NP_001000961  16 GLIDNTELQFPLFLIFLTVYLVTVVGNLGMIILILISSQLHTPMYYLLSSLSFIDCCQSTVIIPKMLLSFVteTNVILYp 95  Norway rat
NP_001000464  16 GLTEKPGLQLPLFFLFLGIYVVTVLGNLGMVMLILFSPHLHTPMYFFLSNLSLVDLCQSSVIMPKMLENFVmvKSVISYa 95  Norway rat
XP_001370100  16 GLTDQPELQVFLFILFLGIYVVTVVGNLGMILLIGIGPQLKSPMYYFLSNLSFVDLCYSSAITPKLLVNFIedKNIICYn 95  gray short-tail...
XP_003766497  48 GLTNQTELQIPLFLLFLGIYLVSMVGNLSLILLIWVSSQLHTPMYYFLSNLSFIDFCYSSVITPKMLENFVseKNIISYs 127 Tasmanian devil
XP_004391061  16 GLTDKPELQLPLFLLFLAIYGVTVVGNVGMIFLITFSSNLHAPMYFFLSNLSAIDLLYSSVITPKLMENFVreQNVISYp 95  Florida manatee
XP_007950343  16 GLTDKPELQLPLFFVLLGIYGITVIGNVGMILVITFNSKFQSPMYFLLGNFSVIDLFYSSVVTPKLLGNFVweKNVIAYp 95  Orycteropus afe...
XP_003766499  79 GLSDHPELQLPLFILFLGIYIVSMVGNLVLILLIRISSQLHTPMYYFLSNLSFIDLCYSSVITPKMLVNFVskKNIISYs 158 Tasmanian devil
Feature 1         ###### ##  #                                            # #####                
Q8WZ84        96 ECMVQLFFFVVFVVAEGYLLTAMAYDRYVAICSPLLYNAIMSSWVCSLLVLAAFFLGFLSALTHTSaMMKLSFCKShIIN 175 human
NP_001000791  96 ECMAQLYLFSFFGIDDSFMLTAMAYDRYVAICNPLLYNVTMSHRVCMLLSTAVYIMGTFGATVHTSyISSRSFCGTsVIH 175 Norway rat
Q15617        96 ECMTQLYFFLVFAIAECHMLAAMAYDRYMAICSPLLYSVIISNKACFSLILGVYIIGLVCASVHTGcMFRVQFCKFdLIN 175 human
NP_001000961  96 ECITQFYFFCAFAVSECHMLAAMAYDRYVAISNPLLYNVTMSYQVCSLMVAMVYSIGLISATTHTIfLLRVLFCKSdIIN 175 Norway rat
NP_001000464  96 ECMAQFYLFDVFAVSECHMLAAMAYDRYVAICNPLLYNVTMSYNVCSWMVVAVYSVGLICATGETVcLLRLLFCKAeDIN 175 Norway rat
XP_001370100  96 ECMTQLFFFCFFIVSECFMLTAMAYDRYVAICNPLLYNVIMSPRVCSFLATGVYSMGAFTTLVHTScMVRLSFCGPnVIK 175 gray short-tail...
XP_003766497 128 GCMAQFFFFLFFVISEFYMLTVMAYDRYVAICRPLLYNVTMVPWFCSLLMAGVYIMGVIGAIVHTScLARLSFCRDnTIH 207 Tasmanian devil
XP_004391061  96 GCMTQLFFFCFFATAESYMLTAMAYDRYVAICSPLLYNVTMSPKVCCVLVTGVYIMASIGAVPHTIsMIMLLFCEDnVIH 175 Florida manatee
XP_007950343  96 ACMTRPFFSCLFATAECYILTAMAYNRYVAICCPLLYNVTMSQNVCNMLVTGVYIMGSTTAMIHTVsMMKLFFCEDsVIH 175 Orycteropus afe...
XP_003766499 159 GCLTQFFFYCAFAVSECYMLTAMAYDRYVAICSPLLYYNTMSQRVCFLLVSGVYTMGTFSGLIQTAyLARLLFCGDnVIN 238 Tasmanian devil
Feature 1                           #  ### ### ##                                            #  #
Q8WZ84       176 HYFCDVLPLLNLSCSNThlNELLLFIIAGFNTLVPTLAVAVSYAFILYSILHIrsSEGRSKAFGTCSSHLMAVVIFFGSI 255 human
NP_001000791 176 HYFCDILPLLNIACSRDytKEFWVMIIVGFNVFASVFAIFISYAFILASILRIrsAEGRSKAFSTCSSHLAAVGVFYGSI 255 Norway rat
Q15617       176 HYFCDLLPLLKLSCSSIyvNKLLILCVGAFNILVPSLTILCSYIFIIASILHIrsTEGRSKAFSTCSSHMLAVVIFFGSA 255 human
NP_001000961 176 HYFCDLFPLLELSCSSTyiNEVLALSFSAFNVIVPAITILSSYVFIIVSILHIqsTGGRVKAFSTCSSHIMAVAVFFGSI 255 Norway rat
NP_001000464 176 HYFCDLLPLLEQSCSSTfiNEVLGLSFGSFNIIVPALNILSSYIFIMATILRIpsTEGRSKAFSTCSSHILAVAVFFGSL 255 Norway rat
XP_001370100 176 HYFCDIIPLLKLSCSSTylNELLLLVIGTFNVFSTTIAIFISYAFILSSILSIqsAEGRSKAFSTCSSHLAAVAIFYGTI 255 gray short-tail...
XP_003766497 208 HYFCDVLPLLKLSCTSTyiNELLVMIVGGFNLLATTLPILISYTFILLSILRIpsTKGRYKAFSTCGSHLAAVSVFYGSI 287 Tasmanian devil
XP_004391061 176 HYFCDILPLLKLSCSITylNELLVVLVGGFNVFATIMPIIISYAFILCNILQIpsAEGKSKAFSTCGSHLTAVGVFYGSI 255 Florida manatee
XP_007950343 176 HYFCDVLPLLKLSCSSTyvNEDLLIFVGGFNVLITTLAIIISYALILCNILQMssAECKSKAFATCGSHLIAVFFFFFFF 255 Orycteropus afe...
XP_003766499 239 NYFCDILPLLKLSCSSTyiNELLLMFLVGFHSLVTTVPIFISYAFIFFSILSIrtAKGRSKAFSTCGSHLAGVIIFYGSI 318 Tasmanian devil
Feature 1        # ##  #         ## ###  #  ##                         
Q8WZ84       256 TFMYFKPps----snSLDQEKVSSVFYTTVIPMLNPLIYSLRNKDVKKALRKVL 305 human
NP_001000791 256 IFMYFKPst-----sDTTQEKVASVFYTTVIPMLNPLIYSLRNKDVKEAIKKAV 304 Norway rat
Q15617       256 AFMYLQPss----isSMDQGKVSSVFYTIIVPMLNPLIYSLRNKDVHVSLKKML 305 human
NP_001000961 256 AFMYLQPss----vsSIDQGKVSSVFYTIVVPMLNPLIYSLRNKDVRVSLKKLL 305 Norway rat
NP_001000464 256 TFMYLQPss----vsSMDQGKVSSVFYTIVVPMLNPLIYNLRNKDVKVAFYKIV 305 Norway rat
XP_001370100 256 IFMYLKPps----ssNMTQEKIASVFYTTVIPMLNPLIYSLRNKDVKDVLKKIM 305 gray short-tailed opossum
XP_003766497 288 IIMYYIPts-----nSVTQEKVGSVFYTTVIPMLNPLIYSLRNKDVKDALRKFI 336 Tasmanian devil
XP_004391061 256 IFMYFKPss----ssNTAQEKVASVFYTTVIPMLNPLIYSLRNKEVRNVLSKAI 305 Florida manatee
XP_007950343 256 NGSIIFMyfkptsssNLAQEKVAAVFFTTVIPMLNPLIYSLRNKDVKNVLSRVM 309 Orycteropus afer afer
XP_003766499 319 IFMYYKPas----syNVIQEKVASVIYTMVIPMLNPLIYSLRNKDVKDSLKKVI 368 Tasmanian devil

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