Conserved Protein Domain Family
sbcB

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PRK11779: sbcB 
exonuclease I; Provisional
Statistics
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PSSM-Id: 236979
Aligned: 217 rows
Threshold Bit Score: 651.513
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
33519912    1 MlsNIKKPTFLIYDYETFGLNPALDRPAQFASIRVNNSLCPVEKKEVFFCQIPNDYLPNPESVLITGITPYDTLSNGLLE 80 
212635816   2 P--SKKQNTLFWHDYETFGANPAKDRPSQFAGVRTDMELNIIDEPVTFYCKLANDYLPSPEAILITGITPQLANQKGTPE 79 
119775108   2 E--NYIQPTIFWHDYETFGASPAKDRPAQFAGVRTDLDLNIIDEPVTFYCRLSPDYLPAPEAILITGITPQLANRQGLPE 79 
157962308   2 S--TNNQPTLFWHDYETFGANPAKDRPSQFAGVRTDMDLNIIGEPETFYCKLANDYLPSPEAILITGITPQLANLKGMPE 79 
71280482    8 N--NTEQPSILWHDYETWGINPKFDKPSQFAGIRTDLDLNIIGEPEMFYCTPPVDYLPHPEACLVTGITPQKAQREGLSE 85 
27904977    4 Q--KNTSLTFLFYDYETFGKNPALDKPSQFSCIQTDIDFNIIGSIQEIFCYPSVDYLPDPESVLITGISPKYTSLFGVNE 81 
15617148    4 F--QKKTPNFLFYDYETFGIHTALDKPAQFACIRTDINLNIIDDPQYFYCFPSDDYLPDPGSVLITHITPQYTEKNGTNE 81 
77360198    4 Q--EQNQATIYWHDYETWGASPQKDKPSQFAGVRTDLDLNIIGEPLIEYCKPQADYLPHPEACLITGITPQVAMKKGLVE 81 
56460478    2 A--QNEQETFYWHDYETWGANPLVDRPAQFAGLRTDTDFNVIGRPLTLYAQPTPDFLPNPEATLITGITPQLAAKQGVGE 79 
71892235    5 I--NVSQPSFFIYDYETFGINPALDRPAQFAGIRTNNTLKPIEKEKIFFCRLSNDYLPDPQSVLITGIAPQDTLRHGLIE 82 
33519912   81 PQFAYQISQKFNVPNTCILGYNNISFDDEFSRNIFYRNFYDPYKWSYHHGNSRWDLLPVLRAFYSLYPTGIQWP-INSKK 159
212635816  80 AEFMAKVHQQFSQENTCVVGYNSIRFDDEVSRYGFYRNFFDPYAREWQNGNSRWDIIDLVRACYAFRPDGINWP-QKEDG 158
119775108  80 TEFMGRIQAIFSRPNTCVAGYNSLRFDDEVSRYGFYRNFIDPYAREWQQGNSRWDIIDLVRACYALRPEGINWP-EKEDG 158
157962308  80 AEFMDKINSLFSQPKTCVVGYNSLRFDDEVSRYGFYRNFIDPYAREWQNGNSRWDIIDLVRACYAFRPEGINWP-EKEDG 158
71280482   86 AEFAARIHTLFTQPNTCVAGYNSIRFDDEVTRYLLYRNFYDPYAREWQNGNSRWDIIDMVRACYALRPEGINWPtVKRDG 165
27904977   82 FEFAKKIYSLFMKSDTCIIGYNNIYFDDEFTRNIFYRNFLNSYEWSWKNGNSRWDMLDLLRACYVLRPEGINWP-RNEDN 160
15617148   82 YNFSQKIYDILMQSNTCVVGYNNINFDDEITRNIFYRNFFDPYEWSWKNGNSRWDILNLLRACYALRPTGINWP-KNELG 160
77360198   82 AEFIAKIHAQFSVPNTCVAGYNSIRFDDEVSRYSFYRNFYDPYEREYKNNNSRWDIIDLVRACYALRPEGIEWP-LKEDG 160
56460478   80 AEFSKAIANEFQKPNTTIIGYNNIRFDDEVTRLLFYRNFYDPYEYSWQNGNSRWDLIDVVRACFALRPDGINWP-ENSDG 158
71892235   83 SEFARRIHQLFCIPKTCILGYNNIHFDDEFSRNIFYRNFHDPYLWAYQRGNSRWDLLHVLRACYSLCPNGITWP-LNIQN 161
33519912  160 --KVSFRLTDLTLANSIQHLNAHDATSDIFATLEIMKLIKYTQPQLFQFLYNHRTKNQLQKIINLNSMKPLIHISNKINN 237
212635816 159 --SPSFKLEQLTVANGLSHEKAHDAMSDVYATIGMAKLIKSVQPKLFDYYFSLRKKQEVSKLIDVLAMKPLVHVSSKISA 236
119775108 159 --SPSFKLEHLTAANGLGHDKAHDAMSDVYATIALARLIKEKQPKLFDYYFRLRRKQAVAEQIDVLAMQPLVHISSKIPA 236
157962308 159 --SPSFKLEQLTVANGLSHEKAHDAMSDVYATIDMAKLIKSVQPKLFDYYFSLRLKQQVSKLIDVLEMKPLVHVSSKISA 236
71280482  166 eeVISFRLELLTAANDISHEAAHDAMSDVYATIAMAKLIKEKQPKLYDFIFNLKNKNQVKDLINTAEMTPIVHTSSKVSS 245
27904977  161 --SVSLRLSDISLANNIVHNVAHNASSDVYATMNIAKLIKQKKPKLFNFFFKYRTKKAILTLIDVNSLNPIVYISRFFGV 238
15617148  161 --LTSFKLSDLTKTNNIVHLNAHNAVSDVYATIEIAKLVKKKQPRLFDFFFKIRKKNELYKLIDLRNFQPIIYISAYFGA 238
77360198  161 --SPSFKLEHLTVANGIEHAAAHDALSDVTATIALAKLIKDKQPKLYNFFFSLRGKKALAELVDVFNMTPLVHTSSRIPA 238
56460478  159 --QPSLKLEHLSVANNIEHGQAHDAMSDVYATIGLAKLISEKQPKLWQWAYSIRRKQKLLNLFNWQAPEPLAHVSGFYGT 236
71892235  162 --KPSFRLKDLTQANAIKHLSAHDAMSDVYATLELTKLIKEAQPQLFQFLFDHRTKYQLQKIIDLDTMNPLIFIMNKINN 239
33519912  238 kYNNFIHFLLPITLHPNNHNVLITYNLLNKLDILWNLNINTLYQNIKDNQQCIYN-LLKQIPLQLIRLNSCPIFIPITVL 316
212635816 237 -LNGCTTLIAPLAYHSTNKNAVICVNLAMDVTPLIELTAEQIRERMYTRREDLAE-DELPIGLKQIHINKSPFLAGAKTL 314
119775108 237 -TQGCATLIAPVAHHMRNKNAVICVNLAMDIQPLIDLDVDALRTRLYTKREDLAN-DELPVPVKQIHLNKCPFVANAKTL 314
157962308 237 -LNGCTTIIAPVAYHSTNKNAVICVNLAMDVTPLIELSVEEIRERMYTRRSDLAP-DELPIGLKQIHINKSPFIAAANTL 314
71280482  246 -AHGCTSWFAPVSYHPVNKNAVICVDLARDISPLLTLSSEEIKARLYTRYDDLAP-DELPIPVKLIHVNKCPVIAPAKTL 323
27904977  239 -VNRYISYIVPILWHPINSNILVSIDLSQDVQKILNFFKRNSILNVNYKEIFLMG-------IRFIYVNRCPILIPTNVI 310
15617148  239 -IYHNMSCILPIAWHENNSNILIAIDLFKDIKTLINMCKKICFDSIFIK-------NLLDSGVVLLHLNRCPILAPIQVI 310
77360198  239 -TQGCTSWVAPMSFHPVNKNAVICFDLTQSPQVLIDLSVEQLRKRLYTKRIDLAE-DELPVGLKLVHLNKCPILAPAKTL 316
56460478  237 -ANRYLSAILPLGFHPKQNSNVVAWDLRVPPMDFADKSVEELTELTYTSRRELEEqGLQKSGIQNIHLGRCPFLAPIKTI 315
71892235  240 kYKNFITYIAPISRHPINPNILIACDLNGNIDNLVNLNINTIYQKLYSNHITIYD-ILKKIPLRFIRLNACPILIPINFF 318
33519912  317 QENNnifkyTSELLSDYQNHLKNLHEIKQKINythLQQKIKSFYVi-IESYLNKiKnklstHVDNQLYN-GFFQYSDCRI 394
212635816 315 TDDN-----AARLDIDKAFAREQYKKLRLHPE---IREKLVAVFDl-QSDREIA-------DPDLQLYSgGFFSQADKAK 378
119775108 315 DDAN-----AERLGIDKAFAREQYRLLKQHPE---IREKLTALFEe-EPQGMSN-------DPDYSLYSgGFFSPADRAK 378
157962308 315 TDEN-----AARLDFDKAFARAQYKKLKQHPE---LREKLVAVFDv-EHEGKTV-------DPDQALYSgGFFSSADKAK 378
71280482  324 LPEN-----AERLAIPRDVCLDNLALLRKHAE---LRDKLSDVFA--TSDFDNDdV-----DAEQALYGgSFFSHSDKAQ 388
27904977  311 RMKD-----RIRLRINYKLFQNNLVLLRKNIF---LKKKLKKFLCsiAEAPKYNgS-----NVDLKMYN-SFFSYIDNNV 376
15617148  311 RKED-----YNRLNFHRFSLNKKIELIKKNMF---FIQNIKIIFSknNNTNQFF-------NVDLEIYN-GFFNSKDKKK 374
77360198  317 LPEN-----AARLGIDREQCLKNLAVLKANSE---LRDKVTEVFNe-QGDYSAT-T-----NVDYLLYD-GFTSHADKAK 380
56460478  316 SAEA-----ADSAALDTAALETNAKWLQENSD---FRDKLMQVFEq-TKEFAPR-T-----DVDHQIYD-GFFSPQDKKH 379
71892235  319 EKNNinttyTMQLSTNYRYCLKNLNFIRMHENsvyLRNKINTLYTi-IGSYINQkNiynnlHVDSQLYH-RLFNNSDRKI 396
33519912  395 IKQIRNiTDVQKLSTIHInsNSNDNRLKSLLFFYRSRNFPHTLNSEEKKIWTTYKKNMLLNQ--------DKYKNYLHHI 466
212635816 379 MEMIRN-TKPMNLAALEL--TFDDERLPEMLFRYRARNYPETLNDSELLRWREFCQPRLNDP---------DYMIRLENI 446
119775108 379 MDIIRN-TSPEHLAALEL--QFDDTRLPEMLFRYRARNYPLTLSYDESLRWREFCQARLNDP---------DYVIRLENL 446
157962308 379 IEIIRH-TQPRNLAALEL--DFDDQRLSEMLFRYRARNYPETLDDSEQYRWREFCQTRLNDP---------DYIIRLENL 446
71280482  389 MDILRG-LSPEQLANHPF--QFQDERLSVLLFRYRARNYPYTLSTEEQQKWQQYCQNKLQYGgkgi-lslDEFMMKIENL 464
27904977  377 IKNIHS-TLPKRIKINFM--KY-DNRINQLFILFLARYRPDMLDYSEKYFWIQRYLNIFSYAn------iQKYENKILKL 446
15617148  375 IQIIRN-TDPVFLKHIFC--NFHDSRLKNLFFRYRARNFFIH-------------------------------------- 413
77360198  381 FAIIRD-AKPEDLADLKL--DFENKKFNTLLFRYRARNWPQTLNQQELDQWRQYCQNKLMHGedqpsinaQDFMITLENL 457
56460478  380 MEIIRS-SEPHQLAGLEL--DFQDKRMPALLFRYRARNYPSTLSDKELNKWRLFCQQRLIEPpegl-lsaEGFALKLEDL 455
71892235  397 IESIRR-THSKELKNLCT--DHVDTRLKPLLFYYRARNFPNTLNYQEQKKWLNYKKNKLFNTdq-----sKSYNDKLNQL 468
33519912  467 NYLLfnQNNIKKINLLSSLKKYYTYFYNII 496
212635816 447 IEET--EQNESKQKLLQALCHYLRSI---- 470
119775108 447 LEET--TKDEKKQKLLGALCQYLQSL---- 470
157962308 447 LEET--EQDESKQKLLQALCHYLRNL---- 470
71280482  465 AHEH--ETDKAKMSVLKALYEFLQG----- 487
27904977  447 IVKY--KNHVRNVQLLEELFEYVKYTRKNF 474
15617148      ------------------------------    
77360198  458 AHEH--DDSEKNLTILKALYNYAQSM---- 481
56460478  456 ANQH--QEDAHKLRLLKSLYDYAASL---- 479
71892235  469 LSIY--KYNDQKITLLHSLQKYYQYLYEVH 496
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