1DFC,1DFC,1HCD,2YUG,4GP3,6B0T,6B0T


Conserved Protein Domain Family
beta-trefoil_FSCN-like

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cd00257: beta-trefoil_FSCN-like 
fascin-like domain, beta-trefoil fold, found in the fascin-like family
The fascin-like family includes actin-bundling/crosslinking proteins facsin1-4, singed, hisactophilin, and FSHD region gene 1 protein (FRG1). Fascin, also called fascin-1, is an actin-binding protein that contains 2 major actin binding sites. It is involved in the organization of actin filament bundles and the formation of microspikes, membrane ruffles, and stress fibers. It plays an important role for the formation of a diverse set of cell protrusions, such as filopodia, and for cell motility and migration. It mediates reorganization of the actin cytoskeleton and axon growth cone collapse in response to nerve growth factor (NGF). Fascin-2, also called retinal fascin, is a photoreceptor-specific paralog of the actin-bundling protein fascin. It may play a pivotal role in photoreceptor cell-specific events, such as disk morphogenesis. Fascin-3, also called testis fascin, is a novel paralog of the actin-bundling protein fascin expressed specifically in the elongate spermatid head. Protein singed acts as an actin-bundling protein that may have a role in the asymmetric organization and/or movement of cytoplasmic components. It has a role in somatic cells during the formation of adult bristles and hairs, and in the female germline during oogenesis. Hisactophilin is a histidine-rich actin-binding protein from Dictyostelium discoideum. It exists in two isoforms, hisactophilin-1 (HatA, also called HS I) and hisactophilin-2 (HatB, also called HS II), which are both myristoylated and distributed between plasma membrane and cytoplasm. Hisactophilin may act as an intracellular pH sensor that links chemotactic signals to responses in the microfilament system of the cells by nucleating actin polymerization or stabilizing the filaments. Protein FRG1 binds to mRNA in a sequence-independent manner. It may play a role in regulation of pre-mRNA splicing or in the assembly of rRNA into ribosomal subunits. It may be involved in mRNA transport, as well as in epigenetic regulation of muscle differentiation through regulation of activity of the histone-lysine N-methyltransferase KMT5B. This family also contains many homologs from bacteria, such as Zobellia galactanivorans beta-porphyranase A (PorA). PorA (EC 3.2.1.178) cleaves the sulfated polysaccharide porphyran at the (1->4) linkages between beta-D-galactopyranose and alpha-L-galactopyranose-6-sulfate, forming mostly the disaccharide alpha-L-galactopyranose-6-sulfate-(1->3)-beta-D-galactose. It is inactive on the non-sulfated agarose portion of the porphyran backbone and displays a strict requirement for C6-sulfate in the -2 and +1-binding subsites. Members of this family contain a fascin-like domain with a beta-trefoil fold, which is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry. The fascin subfamily contains four copies of the fascin-like domain.
Links
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Statistics
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PSSM-Id: 467441
Aligned: 355 rows
Threshold Bit Score: 43.7977
Created: 4-Sep-2001
Updated: 27-Apr-2023
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1DFC_A        12 IQFGLINcgNKYLTAeaf-----gfKVNASAssl-kkKQIWTLEqppdeagsAAVCLRSHl--GRYLAAdk-------dg 76   human
KYC35634     235 DIIALKAdnGKYLNLatsnsyqnlnTIEVEKdvl-drECYFKLIfl----qnKRIALMANn--DKYWSNle--------n 299  Scytonema hofm...
XP_028648718  18 EGVALKAdnGNYLSCigtnesmylePAKANKd----qWCKFQVSkc----pdGKVLLKDPr--GKYLSRydeg----giq 83   reedfish
WP_081369894   8 AKIALKAsnNLFLSViard---gkqTIEAAKssi-dsWCNLSLIfl----geENVALYAVn--NAYLSRiyrg----yaq 73   Granulibacter ...
WP_129888108  14 MKIACMAnnGCYLSCvyrg---falPIEAVKrav-ddSCLFTIAal----dhNRIVLQAEn--HCYVSHvnrq----dve 79   Ktedonosporoba...
PTS79449     664 DLVVFKGanGKYLSRmnqd---gvdAIAAVKadv-diHSIFHAEiq----ldGSVALKADggtHKWLSRinrg---tghd 732  Sphingomonas s...
WP_130734642  20 DIITLKAdnGKYLSRveyv--gvkqAIEATKdsv-diYCKFEVLvh----kdLKISLKADn--KAWLSRitrgsdeepie 90   Flavobacterium...
PTS79449     806 DLITLKAfnGKFLCKatdg---gpdYIRPSQdsv-tlECKFRVEvf----enGQIALKSNggnYQYLSQirhg----svd 873  Sphingomonas s...
AFY30810      46 DTIALRSdtGKYLSRinrg---gvdPAEAAKdav-dpYSKFKVTvl----dgNKIALQSDt--GKFLSRinygg-nsgrn 114  Calothrix sp. ...
TCG05705       6 STISFKAsnGLFVGRde------ntNVILARtesldaFCKFTVQvv----apGKITLLGDn--GLYLSRthedfafssgd 73   Paraburkholder...
1DFC_A        77 NVTCEREvpgpDCRFLIVah----ddGRWSLQSEahRRYFGGTed-------rLSCFAQtv--spAEKWSV 134  human
KYC35634     300 PIIATHNsiesTSLFIVTfl----dnGKICLKTEn-GKYLSRInyggvsgynqIEAVKDsl--diFCEFEV 363  Scytonema hofmannii PCC...
XP_028648718  84 YIRPVKSspddYCKFSVFtd-----nNKILLRADn-GLYVSRIqre----rqnIEAAKEgp--deCCKYEV 142  reedfish
WP_081369894  74 TIEAAKSqmdpFCVFKLEvf----dkDTIALRADt-GMYIGLVsrdg---nnnIETRSNti--deNSKFKV 134  Granulibacter bethesdensis
WP_129888108  80 SVEANKQtiddSCRFILTvl----agSTVALQANn-GLYLSCIdlgi---tdtIEAVKQdi--daACQFTV 140  Ktedonosporobacter rubr...
PTS79449     733 PIEAARDalddFSRFVLFpg----laGDVLLRADn-GQFWGIAdakg---gfrIFARGNgr--epESKFKV 793  Sphingomonas sp. HMWF008
WP_130734642  91 AIKMDSSd--iTTQFKVMqlsntngeFFIALQADn-FRWISRIdrqtergkqtIEAARVktgidvHCMFKI 158  Flavobacterium sp. J27
PTS79449     874 VIEAAKTavdeFSRFVVAyp----dhDKIAFRCVngHYFLPLDpak----gyfLTARGAfd--taESFFTI 934  Sphingomonas sp. HMWF008
AFY30810     115 AIEAAKSdadpYSQFNVKvl----dgGKVALQADn-GKFLSRInyggnggknpIEAAKDai--dpYSQFQV 178  Calothrix sp. PCC 7507
TCG05705      74 CIWAGKKsvdeTCVFSYQdtp---asPSVVLKADn-GLYISLWssqd--vedvLAPTKKdi--dpSCYFQL 136  Paraburkholderia steynii
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