Conserved Protein Domain Family
PLN00170

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PLN00170: PLN00170 
photosystem II light-harvesting-Chl-binding protein Lhcb6 (CP24); Provisional
Statistics
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PSSM-Id: 215087
Aligned: 12 rows
Threshold Bit Score: 407.009
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
15218330    1 MAMAVSGAVLSGLGSSFLTGGKRGATALas-gVGTGAQRVGRKTLIVAaaaaQPKKSWIPAVKGGGNFLDPEWLDGSLPG 79 
115458738   2 ALASTSATASAAVLKTPFLGAKRALANA----VGVAGAKPAPRRALVV----SAKKSWIPAFKSDAEFINPPWLDGSLPG 73 
168009690   1 ----------------------------------------MATKKVSArpaaGGKKSWIPAVKGGGNLTDPEWLDGSLPG 40 
168009894   1 ----------------------------------------MATKKVSArpaaGGKKSWIPAVKGGGNLTDPEWLDGSLPG 40 
224070503   1 -MAAASGAVLNGLGSSFLCGGKRSRALSgigaTGIGSCSVGARKLTIVaa-aQPKKSWIPAVKGGGSFVDPEWLDGSLPG 78 
224054274   1 -MAATAGAVLNGLGSSFLCGGKRNQALLgigaSRTGSFPVGTRKLVVVaa-aQPKKSWIPAVKGGGSLVDPEWLDGSLPG 78 
242074752   3 LASTSATAPAAVLKTPSFLGARRALANA------AAAAKPAPRRSLVVvaavAPKKSWIPAFKSDAEFINPPWLDGSLPG 76 
225447745   1 -MAATSAAVLNGLGSPFLTGGKRSQSLLsagvAAKAGAAVPAPRRLIVva-aAPKKSWLPGVKAGGNLVDPEWLDGSLPG 78 
255585659   1 MAAATSGAVLNGLGSSFLRGPKRSHALLs--aIGANRTASGASTKFVVma-aQPKKSWIPAVKGGGNFIDPEWLDGSLPG 77 
297850008   1 --MAVSGAVLSGLGSSFLTGGKRSSTALgn-gVGTGAQRVGRKTLIVVaaaaQPKKSWIPAVKGGGNFLDPEWLDGSLPG 77 
302815978   5 STSAASAAISQLASSSFVSGSNALLSHC----PSNGARVMAMATRKISakpaSGKKSWLPGVRGGGDLVDPEWLDGSLPG 80 
302808848   5 STSAASAAISQLASSSFVSGSNALLSHC----PSNGARVMAMATRKISakpaSGKKSWLPGVRGGGDLVDPEWLDGSLPG 80 
15218330   80 DFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGVAWFEAGAQPDAIAPFSFGSLLGTQLLLMGWVESK 159
115458738  74 DFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGVPWFEAGAQPEAIAPFSFGSLLGTQLLLMGWVESK 153
168009690  41 DYGFDPLGLGRDPAALKWYREAELIHGRWAMAAVVGIFVGQGWSGVPWFEAGADPAALAPFSFGSLLGTQLLLMGWVETK 120
168009894  41 DYGFDPLGLGRDPAALKWYREAELIHGRWAMAAVVGIFVGQGWSGVPWFEAGADPAALAPFSFGSLLGTQLLLMGWVETK 120
224070503  79 DYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLILMGWVESK 158
224054274  79 DYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESK 158
242074752  77 DFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESK 156
225447745  79 DYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGAAPGAVAPFSFGTLLGTQLLLMGWVESK 158
255585659  78 DYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVIGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLILMGWVESK 157
297850008  78 DYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGVPWFEAGAQPEAIAPFSFGSLLGTQLLLMGWVESK 157
302815978  81 DYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGAAPGAVAPFSFGSLLGTQLLLMGWVESK 160
302808848  81 DYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGAAPGAVAPFSFGSLLGTQLLLMGWVESK 160
15218330  160 RWVDFFNPDSQSVEWATPWSKTAENFANYTGDQGYPGGRFFDPLGLAGKNRDGVYEPDFEKLERLKLAEIKHSRLAMVAM 239
115458738 154 RWVDFFNPDSQAVEWATPWSRTAENFSNATGEQGYPGGKFFDPLGLGGETRDGVYIPDTDKLDRLKLAEIKHARLAMLAM 233
168009690 121 RWIDFLNPGTQSVEWATPWSRTAENFNNSTGLQGYPGGKFFDPLALAGSVQGGQYVPDFSKLERLQLAEIKHARLAMVAM 200
168009894 121 RWIDFLNPGTQSVEWATPWSRTAENFNNSTGLQGYPGGKFFDPLALAGSVQGGQYVPDFSKLERLQLAEIKHARLAMVAM 200
224070503 159 RWVDFFNPESQSVEWATPWSKTAENFANATGDQGYPGGKFFDPLGFAGTLKNGVYIPDEEKLERLKLAEIKHARLAMIAM 238
224054274 159 RWVDFFNPESQSVEWATPWSKTAENFANATGDQGYPGGKFFDPLGFAGTLKDGVYIPDVEKLERLKVAEIKHARLAMVAM 238
242074752 157 RWVDFFNPDSQSVEWATPWSRTAENFANFTGEQGYPGGKFFDPLGLAGTVKDGVYIPDVDKLERLKLAEIKHARLAMLAM 236
225447745 159 RWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLSLAGTIKDGVYIPDVEKLERLKLAEIKHARIAMLAM 238
255585659 158 RWVDFFNPDSQSVEWATPWSRTSENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDVEKLERLKVAEIKHARLAMLAM 237
297850008 158 RWVDFFNPDSQSVEWATPWSRTAENFANYTGDQGYPGGRFFDPLGLAGKNRDGVYEPDVEKLERLKLAEIKHSRLAMLAM 237
302815978 161 RYVDFFEPNTQAVEWATPWSRTAVNFANSTGLQGYPGGKFFDPLRLAGSMKGGDYVPDFDKLQRLQLAEIKHARLAMVAM 240
302808848 161 RYVDFFEPNTQAVEWATPWSRTAVNFANSTGLQGYPGGKFFDPLRLAGSMKGGDYVPDFDKLQRLQLAEIKHARLAMVAM 240
15218330  240 LIFYFEAGQGKTPLGALGL 258
115458738 234 LIFYFEAGQGKTPLGALGL 252
168009690 201 LIFYFEAGQGFTPLGALGL 219
168009894 201 LIFYFEAGQGFTPLGALGL 219
224070503 239 LIFYFEAGQGKTPLGALGL 257
224054274 239 LIFYFEAGQGKTPLGALGL 257
242074752 237 LIFYFEAGQGKTPLGALGL 255
225447745 239 LIFYFEAGQGKTPLGALGL 257
255585659 238 LIFYFEAGQGKTPLGALGL 256
297850008 238 LIFYFEAGQGKTPLGALGL 256
302815978 241 LIFYFEAGQGLTPLGALGL 259
302808848 241 LIFYFEAGQGLTPLGALGL 259
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