2DPD


Conserved Protein Domain Family
RTP

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pfam02334: RTP 
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Replication terminator protein
The bacterial replication terminator protein (RTP) plays a role in the termination of DNA replication by impeding replication fork movement. Two RTP dimers bind to the two inverted repeat regions at the termination site.
Statistics
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PSSM-Id: 426725
Aligned: 9 rows
Threshold Bit Score: 149.07
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2DPD_A                 10 GFLVKQRAFLKLYMITMTEQERLYGLKLLEVLRSEFKEIGFKPNHTEVYRSLHELL-DDGILKQIKVKK---EGAKLQEV 85  Bacill...
KMY44514                4 GFLLKQKAFLKLYLLEIAARPKDYGSVVLDDLRAKFKPYGYSPSHTELYKTYKELY-KQGFVKRRSEIKg-dPHENIQEV 81 
goetting:BRLA_c023660   8 GFLMKQRAFLKLYLITMVEMKKGYALQMLDILQHDFKNLGYRPNHAEIYRSLDDLV-EDGILYRVKKLQp-nMNSKHKEV 85 
WP_046524087            9 GFLIKQRAFLKLYLLTSIEKEPWYGLQLLDELKASFKPYGFVPQHSEVYRALHDLT-EDGILSRKKVKE---NGSKYKEV 84  Mesoba...
jgi:Bcoa_3098          11 GFLIKQRAFLKLYIITNIENGRWYGLQLLDELKKEFKPLGFEPQHSEIYRALHELEdEEQILTKIKVKP---DGAKRKEV 87 
KEZ54413                9 GFLLKQRAFLKLYMIRMTEQDRLYGLKLLDVLRDEFRIYGYRPNHSEVYKSLHELI-EDGILKQVKRKK---EGMKLQEV 84 
KZZ82607                9 GFLLKQRAFLKLYMITLTDQKRLYGLKLLDNMRDEFRRFGYKPNHSEVYKALHELI-DDGVLKQVKKKK---EGMKLQEV 84 
OAB76613                2 GFMIAQRAFIKVYLITMVEQQRGYGYQMLEELRKDFSSFGYSPPQSEIYRALHELV-QEGVLYRTKHLKgndPKVDFQEI 80 
KKB33397                7 KFLIKQRAFLKLFMIKFVEENKLYGMQAMDELKATFKQYGYEPNHSEIYRSLHELI-DDGILKRQKKLQ---EGAKYKEV 82 
2DPD_A                 86 VLYQF-KD--YEAAKLYKKQLKVELDRSKKLIEKALSDNF 122 Bacillus subtilis
KMY44514               82 FIYYL-TEkgKEELEAYRKLMKIEIERSIGILQTALEDHY 120
goetting:BRLA_c023660  86 VYYHFvSDggYEAAMRYKANVKTDLDRCIKILRKAVADNY 125
WP_046524087           85 AVYSI-AD--KEEAKAYKKLVKADLDRCEQLLRKALKDNF 121 Mesobacillus campisalis
jgi:Bcoa_3098          88 VVYKI-KD--MEKAKAYKKLVKADLERCEQLLRKALQDNF 124
KEZ54413               85 VYYQF-ED--YEKAKLYKKQLKTELDRCQKLLGKALQDNY 121
KZZ82607               85 VFYEF-RD--FDAAMLYKKQLKVELERCQGLIEKAIKDNF 121
OAB76613               81 VLYHF-TDegSEKAELYKKQIKGDLDRCLGILNKAVNDNY 119
KKB33397               83 VIYQF-DD--YEKAKLYKKQVKADLDRSMGLLRKALEDVY 119
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