Conserved Protein Domain Family
MC3

?
pfam20131: MC3 
ABC-three component (ABC-3C) system Middle Component 3
Middle Components (MCs) of the ABC-3C biological conflict systems occupy the central position between the catalytic effector and ABC ATPases of the systems. MCs are defined by distinctive patterns of conserved charged residues. As some MCs are HTH domains, they are predicted to function akin to kleisins as DNA-binding partners for the ABC ATPases, assisting in recognition and responding to invasive elements such as DNA viruses.
Statistics
?
PSSM-Id: 466298
Aligned: 47 rows
Threshold Bit Score: 118.498
Created: 27-Mar-2022
Updated: 17-Oct-2022
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
RKJ10406                  1 MSKLTKEFYNVQNPALGAYLLARFSLGYLEENQNmtpMPLLFVVLPMIYKKDVVDFIsSt----QKSSSLHFFADkftek 76 
RHP60895                  2 SKLIENISTLQSNIFILTPILISFYRNLQPKDKN---ILLAYFVFPLVLNSDFLDTItTv----SRASRLSRITN----- 69 
PLK50136                  3 AGPIDHLFTLQRSPFALAPIIHQFYKHSTQQERD---VLLSYLVLPMVLYPPMRDYLlTv----RSTSSLRTLCK----- 70 
WP_028461922              2 SSIVDALYELKYNPFKYGEYIASFYSAISDVDNN---LLLAQLVIPLCSHPVFACKLsNa----NIKSSIWSIFG----- 69  Nitr...
WP_015465070              2 SSVIDALYQLKYNPFKYGEYLTSFYSSLENLENN---FLLAQLVIPLCSHPFFANKLrHa----NNRSSLWSIFD----- 69  Psyc...
jgi:Dacet_2664            2 SSIIETLYELKYNPFEYGAYLSSFYATLDESENN---LLLASLVIPLCSHPFFGQKIhNs----NIRSSMWSIFE----- 69 
PRJNA293381:AMD27_06315   2 TSIVDALYELKYNPFEYGVYFSSFYTALGELENN---LLLAPLVIPLCSHPIFSHKIfKs----NVKSTIWSIFD----- 69 
EPJ48300                  2 SSIVDALYELKYNPFEFGAFLASFYKAESEVENN---LLLAPLVIPLCSHPIIGQKLfNs----NVRSTIWSVFD----- 69 
WP_021711205              2 SSIVDALYELKYNPFEYGSYLASFYTTIDESENN---LLLAPLVIPLCSHPVFNKKIsGavfgeKRQSSIWSVFN----- 73  Vibr...
Q5E4T9                    2 SSIVDALYELKYNPFEYSSYLASFYTAIDESENN---LLFAPLVIPLCSHPDFRKKIsGavfgdKRRSSIWSIFE----- 73  Alii...
RKJ10406                 77 qnsNNDLIIQIQGLSQQYKMMTLEALRLSIIGELISIQDNVYILplrDNINDFKPKTKDIRKMGNAAEKFGIWCSRLSLV 156
RHP60895                 70 ---NKEIMAGFEERFEYFKDITNRCLQYALECGYIKINDDLSVT---VLADNNLQIDCRLSKSINLASQLHKIFTRN-VI 142
PLK50136                 71 ---NQARLVGLTIRVQEFKPLTHAAMLVLRAEQGIEVTEDLSVR-----PIGDVRTANANQVLLEAGRRLALICTGEDVV 142
WP_028461922             70 ---DRTKLYDLQERIDEFQNLTEQSIQYCLVNDWLSVEEDSLAL-------SFSANPEIPLAIQKNAEKLGRIFSGHSVV 139 Nitr...
WP_015465070             70 ---DRTSLYDLQERMDEFKGLTEQSIRYCLINDWLVIDHENLTL-------RYSSDAVTIPAIQKNAVNLGKLISSHSVV 139 Psyc...
jgi:Dacet_2664           70 ---DRTKLYDLQERIDEFQELTEQCINYCLINDWLSVNEQNLSI-------SACDKSDSTCINQKRAEQLGKLFKGHSVV 139
PRJNA293381:AMD27_06315  70 ---DRTKLYDLQERINEFQVLTEQSIQYCLVNDWLFVDEQNLSF-------RGCDNFASKLTKKKSAEKLGRLFYGHSVV 139
EPJ48300                 70 ---DRTKLYDLQERIDGFQALTEQCIQYCLVNDWLSIDVQSLAL-------RSCENSDSVFTNQKSAEKLGRLCSGHSVV 139
WP_021711205             74 ---DRAQLYDLQERIDGFQALTEQCIQYCLINDWLSVNEQGLSL-------HKGDGSDSVFTNQKSAAKLGRLFSAHSVV 143 Vibr...
Q5E4T9                   74 ---DRSKFYDLQERIDGFQTLTEQCIQYCLVNDWLLVDEEDLSI-------RKSECSDVAFIYQKSAEKLGRLFCGHSVV 143 Alii...
RKJ10406                157 EISQILKVRF 166
RHP60895                143 NTYYAFGIYK 152
PLK50136                143 STYRTLGFKS 152
WP_028461922            140 EIYEHLGVKP 149 Nitrosomonas cryotolerans
WP_015465070            140 ETYAFLGVKP 149 Psychromonas sp. CNPT3
jgi:Dacet_2664          140 EIYAFLGVKP 149
PRJNA293381:AMD27_06315 140 EIYAFLGVKP 149
EPJ48300                140 EIYMFLGVKP 149
WP_021711205            144 EIYAFLGVKP 153 Vibrio azureus
Q5E4T9                  144 EVYAFLGVKP 153 Aliivibrio fischeri ES114
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap