Conserved Protein Domain Family
ABC_choXWV_ATP

?
TIGR03415: ABC_choXWV_ATP 
choline ABC transporter, ATP-binding protein
Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines. [Transport and binding proteins, Amino acids, peptides and amines]
Statistics
?
PSSM-Id: 188317
Aligned: 9 rows
Threshold Bit Score: 573.262
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WP_010911148   5 VDFKNVDIVFGADQAGSLAMIDKGATRAEILEKTGNVLGCAGASLTVHEGEISVLMGLSGSGKSTLLRAVNRLNVVSRGQ 84  Mesorhizobium loti
WP_011221749   4 ISIKNLDVIFGKQTAKSLAMLDDGKSRQEIIDATGDVVGVHDVSLDIEKGEICVLMGLSGSGKSSLLRAINGLNTVSRGS 83  Photobacterium ...
WP_011394822   2 IEFKNVDVVFGDQPQQAIALLDEGQDREAILDRTGHTVAVNNASLRVEKGEICVLMGLSGSGKSSLLRTANGLNPVARGQ 81  Hahella chejuensis
WP_010951660   4 IRFEDVDVIFSNKPREALALLDQGQTREQILKQTGLVVGVEKANLDINKGEICVLMGLSGSGKSSLLRCINGLNTVSRGK 83  Pseudomonas putida
WP_011151882   4 ITIENVDVVFGDKPEHALALLDQGKTRQEIIDEAGQVVGVNKVSLTIKEGEICVLMGLSGSGKSSLLRAVNGLNSISRGS 83  Vibrio vulnificus
WP_010969913   5 VVFKNVDIIFGKNPQLAVQMVDQGKTRDEIGAATGLVLGVAGASLTINEGEILVLMGLSGSGKSTLLRAVNGLAPVVRGE 84  Sinorhizobium m...
WP_006314637   5 IIFGNVDIVFGDRPDAALALIDKGSTRDEINAQTGLVLGVANASLSVSEGEILVLMGLSGSGKSTLVRAVNGLAPVVRGS 84  Agrobacterium
WP_006071257   4 IALEDVCIIFGKNVDEALHLADRGETRSRIQTETGLVLDVHNCTLDIEEGEILVLMGLSGSGKSTLLRAINRLNPISRGR 83  Brucella
ETD89072      18 VRFDNVSIVFGDHPDRALPLMDQGMSRAEIQARTGQVLGVHDCSLSVAEGEILVLMGLSGSGKSTLLRAVNGLNPVCRGK 97  Rhodobacter cap...
WP_010911148  85 VLVKDGDKIVDVVTCDEPTLRRLRQKQVAMVFQQFGLLPWRTVEENVGLGLELAGVPEAERKERVHRQLKLVNLDQWSKK 164 Mesorhizobium loti
WP_011221749  84 LNIQDGDEPINLANCDKAALRHLRTNRISMVFQKFALMPWLSVLDNAAFGLEMQGISKAERRRRAEEMLEMVGLAEWQNN 163 Photobacterium ...
WP_011394822  82 VLITTEDGEQDFFALPVEQQRKLRLERITMVFQKFALMPWLTVGENVAFGLEMKGMSRAQVKKRVDEQLELVGLAQWRDT 161 Hahella chejuensis
WP_010951660  84 LFVEHEGKHIDIANCSAAELKMMRTKRIAMVFQKFALMPWLTVRENISFGLEMQGRPEKERRKLVDEKLELVGLTQWRNK 163 Pseudomonas putida
WP_011151882  84 LRIKDGDQQVDLAQCDEATLRHLRTHRVSMVFQKFALMPWLTVLDNVAFGLEMQGMAKKQRRKKAKEQLEMVGLSEWQDK 163 Vibrio vulnificus
WP_010969913  85 VEVKTANGSLNPYRCNAKSLRDFRMHTVSMVFQQFALLPWRTVADNVGFGLELAGVADAERRKRVGEQLELVNLAKWADR 164 Sinorhizobium m...
WP_006314637  85 VSVKTKSGYVDPYRCPAKALRDLRMHTVSMVFQQFGLLPWRNVADNVGFGLELSGVPEAERKRMVAEQLELVNLSAWADR 164 Agrobacterium
WP_006071257  84 ALVHDGERSIDVGKADRATLRRLRTELVSMVFQQFGLLPWRSVEENVAFGLEISGMGKEERLDKARQQLELVGLQDWATR 163 Brucella
ETD89072      98 VEVCDGNGLVDVTHADPQTLRRIRQTRVAMVFQQFGLLPWRTVRENVGLGLELSGMGKAERRDRVDAQLKLVNLTDWAER 177 Rhodobacter cap...
WP_010911148 165 YAHELSGGMQQRVGLARAFATEAPILLMDEPFSALDPLIRTKLQDELLQLQAELKKTIIFVSHDLEEALKIGSHITIMEG 244 Mesorhizobium loti
WP_011221749 164 YPHELSGGMQQRVGLARAFTMDSDILLMDEPFSALDPLIRSQLQDELIELQRTLNKTIVFVSHDLDEALKLGNKIAIMES 243 Photobacterium ...
WP_011394822 162 KPGELSGGMQQRVGLARALAMESDIILMDEPFSALDPLIRNQLQDELLRLQEKLNKTVIFVSHDLDEALKLGNHIAIMKD 241 Hahella chejuensis
WP_010951660 164 KPDELSGGMQQRVGLARALAMDADILLMDEPFSALDPLIRQGLQDELLGLQAKLSKTIVFVSHDLDEALKLGTRIAIMKD 243 Pseudomonas putida
WP_011151882 164 YPHELSGGMQQRVGLARAFAMDTDILLMDEPFSALDPLIRAQLQDELIQLQKKMNKTILFVSHDLDEALKIGNNIAIMES 243 Vibrio vulnificus
WP_010969913 165 KVNELSGGMQQRVGLARAFATGAPILLMDEPFSALDPLIRTRLQDELLEFQRRLKKTIIFVSHDLDEAFRIGNRIAIMEG 244 Sinorhizobium m...
WP_006314637 165 KVGELSGGMQQRVGLARAFATGAPILLMDEPFSALDPLIRSRLQDELLEFQSRLKKTILFVSHDLDEAFRIGNRIAMMEG 244 Agrobacterium
WP_006071257 164 KVGELSGGMQQRVGLARAFATGAPILLMDEPFSALDPLIRTRLQDELLAFQSRLRKTIVFVSHDLDEAMKIGNRIAIMEG 243 Brucella
ETD89072     178 KVGELSGGMQQRVGLARAFATEAPILLMDEPFSALDPLIRAKLQDELLELQSTLKRTIVFVSHDLDEAFKLGNRIALMEG 257 Rhodobacter cap...
WP_010911148 245 GRIVQTGAPEDIVLRPANDYVRDFIANVNPLSVLTAWNVMRDRRDLEHGDNGWVWLDRRKTTRFKIDdhglV----AAAE 320 Mesorhizobium loti
WP_011221749 244 GRLIQHGKPEEIVLNPNSAYVAEFVAHTNPLNVLCGRSLMTEVTALESQDSKLVLSQHDETYISTDPqghvT----SVTR 319 Photobacterium ...
WP_011394822 242 GCIVQHDTPENIVLNPANDYVRSFVSHTNPVNVLLAQSLMRPLTTAEKVADEICVSKRYDYWLKTAD----KledsQVRY 317 Hahella chejuensis
WP_010951660 244 GRIIQYSKPEEIVLNPADEYVRTFVAHTNPLNVLCGRSLMRSLDNCKRVNGSVCLDPGIDSWLDLGEggalK----RARQ 319 Pseudomonas putida
WP_011151882 244 GCLIQHGAPEEIVLSPETDYVKDFVAHTNPLNVLKGRTLMLSKESLTQTDGAWQVCGRQDLWLEQSD----K----QMTL 315 Vibrio vulnificus
WP_010969913 245 GRIIQCGTPQEIVKKPANQYVADFVQHMNPITMLTAKDVMQ------------------------------T----GVGR 290 Sinorhizobium m...
WP_006314637 245 GHIIQCGTPQQIVRQPATPYVADFVQNMNPISMLTAADVMKR----------------------------------GVDE 290 Agrobacterium
WP_006071257 244 GRIVQCGTPQEILLHPANEYVADFVAHMNPLGVLRAADIMVP-----------------------------------FDR 288 Brucella
ETD89072     258 GRLVQMGTAREIIANPVDEYVAEFVAHMNPLGVLTAEDMAEP-------------------------------------G 300 Rhodobacter cap...
WP_010911148 321 RDGKPAVWVSCADVEAQSEEAAQVFWaNPGTSLKTVMLAMHRsqTAPVALFDEQSRFVGAIGIRDVLSAVLRR 393 Mesorhizobium loti
WP_011221749 320 QGKALPLHLWQAGDCFEGLKQDSLVIaNPDISMREGLEIRYR--TGQPVLLVEDGPLIGVLADNNFYHALLGK 390 Photobacterium profundum
WP_011394822 318 ADAVFPVQRWSSEQEVESLQKLPTII-PADTLMRDVVAIRHF--TGHAILVGGEKEISGVINDQNIYHALLGR 387 Hahella chejuensis
WP_010951660 320 GQNGLDMQKWAPGQDVELLERRPTVV-HADIGMREALQIRYQ--TGNKLVLQDNDRVVGILGDTELYHALLGK 389 Pseudomonas putida
WP_011151882 316 RNSDKRLLAWPCEQQDPVVDDNVLLVaSPDLDMREMIALKKK--NRQPILLAEDEQFVGVLDTEHIYQALLGN 386 Vibrio vulnificus
WP_010969913 291 AAASTGVSATA----------------RPTTPLVDILDAMSR--QPGSIGVVDNGSVVGTIDAQNIVEGLTRH 345 Sinorhizobium meliloti
WP_006314637 291 RSGRLTVAATA----------------LPSSPLIDILDALSK--HAGAIGVVDNGAIIGTISADEVVAGLTRH 345 Agrobacterium
WP_006071257 289 NAAPRPFAATA----------------RRETLVRDLMTAVAD--SGGDVGIIENGAIVGKIAADDIVRALAWH 343 Brucella
ETD89072     301 AAEGTPIA--------------------PETPVIKVMELL-K--TVPAVALTDGRR----ITREGVIARLIDP 346 Rhodobacter capsulatus...
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap