Conserved Protein Domain Family
Root_cap
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pfam06830: Root_cap 
Root cap
The cells at the periphery of the root cap are continuously sloughed off from the root into the mucilage, and are thought to be programmed to die.This family represents a conserved region approximately 60 residues in length within plant root cap proteins, which may be involved in the process.
Links
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Statistics
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PSSM-Id: 462016
Aligned: 36 rows
Threshold Bit Score: 87.2958
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
CAH67155     263 AFKFYSISADVHGVLGQTYRPDYVSAgVDVGAKIPVMGGAGKYAVSDIFATDCEVARF 320
ERN15954     293 QFRFKNLTDGVEGVLGQTYRPGYTSP-VKRGVAMPMMGGEDRYRTPSLLSPQCTSCRF 349
XP_018676473 292 QFRFAGLTERVEGVLGQTYRAEYVSP-VKKGVAMPMMGGEDKYRTTSLLSTSCPFCRF 348
XP_006841761 274 SFSL-----EVEGVLGKTYRPGFKSP-VKRRVAMPVMGGEDKYETSSLVAADCNVCVF 325
XP_009398347 268 QFKFFGLSERVEGVLGQTYQPNFQNP-VKRGVPMPIMGGEDRYFTSSLLATDCKRCIF 324
EFJ15093     268 QFKFFNLSSAVDGVLGQTYRPEFHNP-VKVGVPMPIMGGEDRFQVSSLISADCKSCVF 324
XP_002267215 183 QFRFFNLSAQVEGVLGQTYQPNFHNT-AKAGVAMPIVGGADKYRTSSLLSADCKSCLF 239
EEF28678      76 QFKFYGLSPKVEGVLGRTYQPDFENP-AKPGVAMPVVGGEDKYRTSSLLSADCGSCMF 132
RID44944     256 QFRFLRLSPNVEGVLGRTYREDFQNP-AKPGVAMPVVGGEDKYRTSSLLETSCNACVY 312
XP_009417276 251 QFRFFGLSPEVEGVLGRTYRPDFKNT-AKWGVAMPVVGGEDEYRTSSLVSPDCNRCLF 307
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