1G6O,2OAP,4IHQ,4II7,1NLZ,2PT7,2GZA


Conserved Protein Domain Family
VirB11-like_ATPase

?
cd01130: VirB11-like_ATPase 
Click on image for an interactive view with Cn3D
Type IV secretory pathway component VirB11-like
Type IV secretory pathway component VirB11, and related ATPases. The homohexamer, VirB11 is one of eleven Vir (virulence) proteins, which are required for T-pilus biogenesis and virulence in the transfer of T-DNA from the bacterial Ti (tumor-inducing)-plasmid into plant cells. The pilus is a fibrous cell surface organelle, which mediates adhesion between bacteria during conjugative transfer or between bacteria and host eukaryotic cells during infection. VirB11-related ATPases include Sulfolobus acidocaldarius FlaI, which plays key roles in archaellum (archaeal flagellum) assembly and motility functions, and the pilus assembly proteins CpaF/TadA and TrbB. This alignment contains the C-terminal domain, which is the ATPase.
Statistics
?
PSSM-Id: 410874
Aligned: 97 rows
Threshold Bit Score: 143.449
Created: 17-Aug-2020
Updated: 25-Oct-2021
Structure
?
Program:
Drawing:
Aligned Rows:
 
ATP bindinghexamer
Conserved site includes 7 residues -Click on image for an interactive view with Cn3D
Feature 1:ATP binding site [chemical binding site]
Evidence:
  • Structure:1G6O; Helicobacter pylori traffic ATPase with bound ADP, contacts at 4A
  • Comment:contains Walker A and Walker B motifs

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                             ######                                                     
1G6O_A       160 AISAIKDGIAIGKNVIVCGGTGSGKTTYIKSIXEFIpkeERIISIEDTEEIVFkh-------hkNYTQLFFggn------ 226 Helicobacter py...
ACJ66889     116 VATLLDLLVKSEVGIAICGRTGTGKTEVLKKLMGSTddsKKICLIEDTMDSHLktly----pnkDINSYRVlldkdrp-- 189 Bacillus subtilis
NP_053180    201 IYDFFKVVMESRNNILISGETGTGKTEVLKLLFSFVrfdHKAIMIEDVPETHVkslf----pdkDVFSWLTgng------ 270 anthrax
ABV61258     177 IFDLLKAIVASKSNVTIAGETGTGKTELQKLLLSFVeykDHIVMIEDTPESHAkilf----pdkDIKSWITnps------ 246 Bacillus pumilu...
YP_004243502 178 MYEFFKAAVAAKANIGISGETGSGKTEFQKFLLSFIpfgEKIIWIEDTREGHLkelf---gdtkDIHSWLTspg------ 248 Bacillus subtil...
EFY08386      71 ALKFLKYAVRSKCNILVSGLPGAGKTELIKFLAGYIsrdERIITIEDSYELHLkqiy----pplDTVEIKVder------ 140 Erysipelothrix ...
CBK91349     202 MLDFLAECLRYGISICVAGATSSGKTTLAGWLLTTIpdnKRIFTIENGSRELAlvrekdgkvtnSVIHTLTrfsene--- 278 Eubacterium rec...
YP_001634529 181 ASDLLLAALNGGASLLIAGPTGSGKTTLAAALTQAIgrhMRLVVIEDGGELPRs---------aNSLHIEAppe------ 245 Chloroflexus au...
NP_348600    217 IYSYLVKRVKAGVNILLCGKGGSGKTTMINALLEKVpydRAALIIQESEELFSd----------HPNMMFQkekiktg-e 285 Clostridium ace...
ABP68207     191 QAQQLAALVKERKSIVISGPPSSGKTTLLAALIREIpehERYAIIQETFEIPRi----------HPNSFVEvmrtselqp 260 Caldicellulosir...
Feature 1                                                                                        
1G6O_A       227 ----itSADCLKSCLRXrPDRIILGELRs-SEAYDFYNVLCSGHkGTLTTLHAGssEEAFIRLANXsssnsaa-----rn 296 Helicobacter py...
ACJ66889     190 eqtkvsYMDAVETGLRNnPDYLMISEIRngDATEGLLEAALTDH-AVMTSLHASeaSGIVSRMISLyktvrd-------- 260 Bacillus subtilis
NP_053180    271 ----vtVTDEIVAALRNnPRWIMISELRg-KETYEMIQAVLSGH-HVVTSLHSVdaETSPKRLVNMskigyq-------- 336 anthrax
ABV61258     247 ----inIEILVKAGLRNnPAWQVVSETRg-REAYEMMQGILTGH-RLITTLHAVnaRAIPSRLINMmkmghd-------- 312 Bacillus pumilu...
YP_004243502 249 ----vtITDLVKAALRNnPKWICVSETRg-MEAYEMLQAVLSSH-SIITTLHANdvKTIPRRFINMmkmgyq-------- 314 Bacillus subtil...
EFY08386     141 ----fnYSQAIKASLRQrPNWLLLSEVRg-SEIVDLLRCISTGA-SVMSTVHARsaMEIPDRIQQMtpina--------- 205 Erysipelothrix ...
CBK91349     279 -kqnidQDMLLDMALRFnPEIICVGEMRs-SEAYTAQESARTGH-TVLTTIHSNscESTYSRMRTLckrkyd-------- 347 Eubacterium rec...
YP_001634529 246 ---pggFGRAVTFALRQkPNYIIVGEVRg-GEAMAMLQAAATGH-PGLGTIHAAtvQGALRNLERMaliglaqettgagq 320 Chloroflexus au...
NP_348600    286 ndaeysLGDLTRFAMTEdLDMIVIGEIKg-KEALNLFKVVGTGH-DGWGSVHSNgsKEAVNKLIDYmqeanp-------- 355 Clostridium ace...
ABP68207     261 wlkqytLFELVKIGLLEtLGRVIIGEVKg-AETYEWVFAVYSGMnGSMTTVHTNssQETIPKLLMLmkmant-------d 332 Caldicellulosir...
Feature 1                                               #         
1G6O_A       297 ikfesLIEGFKDLIDXIVHINHh----------------KQCDEFYIKH 329 Helicobacter pylori
ACJ66889     261 kdevlLGKDIVKNIPIGLHMVCeekk----------gyvRYLKELVEFT 299 Bacillus subtilis
NP_053180    337 vdeksLEEDIMRYFNFGFHIKRvvvkttdttgkpikrvvRYLAKIVEYS 385 anthrax
ABV61258     313 idetsMREDIFRYLNFGIHIEKiedee--------ghmqRYLKEIVEFL 353 Bacillus pumilus SAFR-032
YP_004243502 315 ldeksTLGDIYENFHLGVHLKAteln---------gktvRYLSEVSEYN 354 Bacillus subtilis subsp. natto
EFY08386     206 -tehiNEQKISDAINIGIHIDLkiss---------ggiqRYVREIVVFT 244 Erysipelothrix rhusiopathiae ATCC 19414
CBK91349     348 mddevLMDLVTEAFPIVVFTKQlen------------kkRRLMEIMECE 384 Eubacterium rectale DSM 17629
YP_001634529 321 aaaqiVRGLITSDVVNLLVVQIgrtp----------tgkRGVVAIEEVL 359 Chloroflexus aurantiacus J-10-fl
NP_348600    356 nlsrvSLLKLLSAIDIIIFMKD-----------------YKVMEITEVS 387 Clostridium acetobutylicum ATCC 824
ABP68207     333 lpadfLESVLLSSIDYILYVKG-----------------FKLREIYNVK 364 Caldicellulosiruptor saccharolyticus DSM 8903

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap