Conserved Protein Domain Family
CENP-R

?
pfam06729: CENP-R 
Kinetochore component, CENP-R
This family consists of mammalian kinetochore sub-complex proteins CENP-R, also referred to as nuclear receptor co-activator NRIF3 proteins. NRIF3 exhibits a distinct receptor specificity in interacting with and potentiating the activity of only TRs and RXRs but not other examined nuclear receptors. NRIF3 as a co-regulator that possesses both transactivation and transrepression domains and/or functions. Collectively, the NRIF3 family of co-regulators may play dual roles in mediating both positive and negative regulatory effects on gene expression. CENP-R is one of the 15 components that make up the constitutive centromere associated complex (CCAN) part of the kinetochore. A sub-complex of CCAN, consisting of CENP-P/O/R/Q/U self-assembles on kinetochores with varying stoichiometry and undergoes a pre-mitotic maturation step. Kinetochore assembly is a cell cycle regulated multi-step process. The initial step occurs during interphase and involves loading of the 15-subunit constitutive centromere associated complex (CCAN). Kinetochores are multi-protein megadalton assemblies that are required for attachment of microtubules to centromeres and, in turn, the segregation of chromosomes in mitosis.
Statistics
?
PSSM-Id: 429086
Aligned: 10 rows
Threshold Bit Score: 204.251
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
XP_027318666  32 KkKNLNLYSPTTGTRQISPFSSPTSRNARDLRNGLSNDLpgdgnKQNELEIRLSRRGQCQAEKD-AFAELQSKVKSSLVR 110
XP_014710837  25 R-KNVTAYSPTTGTCQMSPFASPTSSKEGEHESGPSNGK-----RKKLNCLSLTQRKEATTKDSdEFMVLLSKVEKSSEE 98 
Q9CQ82        25 RkKSITAYSPTTGTYQLSPFSSPATPKEQEHRNGPSNET-----RKRSN-LSSPVRQESTVKDRdGFMVLLSKIEISSEK 98  house mouse
XP_012403017  25 G-QLIASYSPTTGTRQISPYSSPKSHNGRELRNGPSNEQ-----VEADQSHTVPRRGQPRAEDKdDIMILLYTIDKSLEK 98 
Q1T763        25 KkKDLNSYSPTTGTCQISPFSSPTSHNAEDLRNGLSHGD------ETNSESRLSRRGQPQTAED-AFAELQSNVKSSLVR 97  chicken
EHA99592      25 RkRSITSYSPTTGTHQMSPFSSPTSSKKQKHRNRPSNGK-----RKKLDHLGLAERKECPPKDD-EFMVMFSKAEKSLEE 98 
XP_003775722  25 RkKSVITYSPTTGTCQMSLFASPTSSEEQKHRNGLSNEK-----RKKLNHPSLTESKESTTKDNdEFMMLLSKVEKLSEE 99 
XP_014312227  25 RkRGFTNYSPSTGTCRLSPYASPTNSKEQEHKNGPTNGK-----KKKLNHLSLTQRNKSTTKDN-ELMVLLSKVEKSSEE 98 
Q2KIL6        25 RkKSAADYSPTTGTCQMSPVASPTSSKEQENRNGPSNGK-----RENLNHLSINKRMESTMQDN-EFMVLLSKVEKSSEE 98  cattle
XP_030134450  26 KmSNLNFYSPTTGTRQLSPCSSPTWDRAQDPSSAPAEGDg---nEQSNSKSGFSRRGQPQTEDD-VFLQLQSQVRNSLPR 101 zebra finch
XP_027318666 111 FLKTRASLTNLQALEGSRELENIIGVSDLSCVLsAEVQKTQVLMGQAEELQLLERNHGKLPAQE 174
XP_014710837  99 IMEIMQNLSSIQALEGSRELENLLGISRASCFL-REMQKTKELMTKATKQKLFEKKSSGLPNKG 161
Q9CQ82        99 TMEIMKNLSSIQALEGNRQLEDLIGVSLVPCSLkSEARKTKELMTKVIKQKLFEKKKSRITPKD 162 house mouse
XP_012403017  99 FMETWQSLKHLQTLLGQPELENLIGVSCTSLDLrSELKKTRELMMKARKWDQLRKKTLPRDFGH 162
Q1T763        98 ILKARENLTSLQALEGSRELENIIGVSDSSHILsAEVQKTQALMSQAEELQLLKRNHGQLPARE 161 chicken
EHA99592      99 IVEIMWNLRSVQALEGNKKLENLLGTSCTSRFLkREVKKTKELLTKVTKQELSEKKTSGLLHKE 162
XP_003775722 100 IMEIMQNLSSIQALEGSRELENLIGISCASRFLkREMQKTKELMTKVNKQKLFEK-STGLPHKE 162
XP_014312227  99 IMEITQSLSITQALNDSRKLQNLIGISYGPCFLkREMKKTKELMTKVIKQKLFEKKSSEPSNKE 162
Q2KIL6        99 FMEIMQNLSSIQALKGSKELENLIGIPHASCVFkREMQKTKKLMTKVIKQKLFKKKNSGLPNKG 162 cattle
XP_030134450 102 ILKLRANLTSLKALEGSRELENILGVSHSSCDLsAELQKTQALVSQAEKLQLLKENYGKVPARD 165 zebra finch
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap