1FGI,1MQB,1Y6B,1XBC,1U54,2P0C,1K3A,1LUF,1MP8,1YVJ,1SM2,1BYG,2IVV,1RJB,1R0P,2G2F,1IR3,1M7N,1Y57,3CD3,2SRC,3AOX,2OO8,2GS6,4AOJ,3ZZW


Conserved Protein Domain Family
PTKc

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cd00192: PTKc 
Click on image for an interactive view with Cn3D
Catalytic domain of Protein Tyrosine Kinases
PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers.The PTK family is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.
Statistics
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PSSM-Id: 270623
Aligned: 102 rows
Threshold Bit Score: 238.978
Created: 1-Nov-2000
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 26 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:
  • Comment:includes ATP binding and substrate binding sites
  • Structure:1K3A; Human IGF-1R tyr kinase binds AMP-PCP and substrate IRS-1 peptide; defined at 3.5A contacts.
  • Structure:1IR3; Human InsR tyr kinase binds ATP analog and peptide substrate; defined at 3.5A contacts.
  • Citation:PMID 9312016
  • Structure:2G2F; Human Abl tyr kinase binds peptide substrate and thiophosphoric acid; defined at 3.5A contacts.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        #####   #                     # #                                             
1FGI_A      27 KPLGEGAFGQVVLAEAigldkd--kpnrvTKVAVKMLKSDatek--dlsdLISEMEMMKMIgkHKNIINLLGACtq---d 99   human
1K3A_A      16 RELGQGSFGMVYEGVAkgvvk----depeTRVAIKTVNEAasmr--erieFLNEASVMKEFn-CHHVVRLLGVVsq---g 85   human
NP_494971  199 VNLGSGQYGCVAIGAYr-----------rRLVAIKKLTSSgerllldreaLLKEAMFMQKLq-HPYITKIIGISid---k 263  nematode
NP_498153  527 DQIGKGAFGTVKKGKFrnsl------gesVPVAVKKLGLResskd-ernpAFSEMEILEMVa-HPNIVFYYGFSisg-de 597  nematode
P83097     497 DVIGDGRFGEIITGKVstn-------dfaRDCTLHVLCLDdlngt-tqaqLLRELRQLSQLkrQEHLLDFYGVSas---p 565  fruit fly
XP_973940  432 NLLGIGRFGRVNSGSIyen-------stlIPVAVYSIQDKklsad-dkknMLRDLDVLIKTrkHDNVIALVGTCet---s 500  red flour beetle
AAB94183    68 ITVGMGKFGPIHRAMFssfn------gsvHDVNVYLLKNIarlsdeelvkLTSLLKSNIAAgaHQNVVSLCGVSps---g 138  nematode
NP_496123  175 RPLGSGEFGIIRKGFLrsknsknketesrLEVAVKSPLNEynhi--qqelIYDELKVMCAVgkHPNILALVGGIti---g 249  nematode
AAC26948   807 EPIGSGHFGVVRRGILkg---------tkTVVAVKSSSYRssig--fqkvIVEELKLMSAIpkHPNVLALVGAItknlrh 875  nematode
T29551    1869 DYIDTCAYGIVHSGTAeevpm---swekdVRVAIKKLKPNhsfq--ekmmFMKEAILLNNLd-HPNIVKELGVCit---p 1939 nematode
Feature 1            ####  ##                                                               #  
1FGI_A     100 gPLYVIVEYAsKGNLREYLqarrppgleys-------ynpshnpeeqLSSKDLVSCAYQVARGMEYLAS--KKCIHRDLA 170  human
1K3A_A      86 qPTLVIMELMtRGDLKSYLrslrpeme-------------nnpvlapPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLA 150  human
NP_494971  264 tPPMLLIELM-ACPLLDHLqky----------------------gkyTTIGEKLLYLWQLARGLSFMAK--ENVVHRDIA 318  nematode
NP_498153  598 qALYLLFELM-DTSLDKFIdks----------------------daiLSENERLDILAQICRGMSFLHTrtPSIVHGDLA 654  nematode
P83097     566 dWFYLIFEQQ-RMSLKRKLvesrlma--------------psprltsLSEQLVLQWIYELASAMNYLSS--CQVVHRQLC 628  fruit fly
XP_973940  501 qMVFVVLEYV-SMNLKDLLlgsrdsl---------------pgkfsnMTENQALDIAINVAKGMSHLAS--NKIIHKQLC 562  red flour beetle
AAB94183   139 sDVMLMWEPLhQSVLRGVLresrcarfg----------tepfnmasfLSSERLAAIAIGCCNGVEHLLK--KNVFPPHLS 206  nematode
NP_496123  250 eKRMIISELVeNGDLLSFLrknrrnftid--------qlafepekpsLGLVDLVSFAFQIAKGMEYLIH--VPCVHRDLA 319  nematode
AAC26948   876 gELYILMEYIdGGNLRDFLqqrrnvfidelhdnfdeniplirpdfnsLSTTDLVGIAHQIANGMEWLGN--VPCVHGNLC 953  nematode
T29551    1940 gQELILLEYMeGGNLLKFLqkstpn----------------eyqsseLSPRDLLSISVDIARGMNYLER--LPHVHKNLS 2001 nematode
Feature 1       ## #                #                  #####        #                          
1FGI_A     171 ARNVLVTEd------NVMKIADFGLARDihhidy-ykkttNGRLPVKWMAPEALFDr---IYTHQSDVWSFGVLLWEIFT 240  human
1K3A_A     151 ARNCMVAEd------FTVKIGDFGMTRDixetdx-xrkggKGLLPVRWMSPESLKDg---VFTTYSDVWSFGVVLWEIAT 220  human
NP_494971  319 ARNVLFSRh------GIVKVSDLGLSDYesklq--avntsKERLPRAWLPPESVSKtggnKFNEKTDVWMFGATSVEVFQ 390  nematode
NP_498153  655 ARNVLLKKhpvyikkYICKITDLGLAKTcldely-tsyddPTKIPFKWLPPEVLGSr---TLSLKTDIWAFGIVCFEVCD 730  nematode
P83097     629 SHSVFVTSd------FKLKLSVFGPLPYmni-------arQQPDHNRWLAPEVLRHq--hHHSTRSDVWSLACVAWECCA 693  fruit fly
XP_973940  563 ARNVMVANg------FIPKISGYGLSQFys--------hnNLPDYTRWTAMEVFKGq---AHNLKSDVWSFGCLLWEICV 625  red flour beetle
AAB94183   207 TSNVLLAEr------GIVKIGGFGLAEHhald----mtteSAPTKLRWMPPEYFKRdqkmIYNEQTMIWPLGVTLWEIFS 276  nematode
NP_496123  320 LRNVLIKGn------MVIRIADFGLARRhknkdyyktqsvDTPLPIHWMAPESIDKl---LFTQKSDVWSYGVCLYELFS 390  nematode
AAC26948   954 CRKVLISKt------KTIRITDYGVGDRq-----------RKSSSMRWMAPEAIEHq---MFSSKSDVWSFGICLYEIFT 1013 nematode
T29551    2002 ARKCLLAGr------PGVTKLEMGMSKElsngqv-nrsdlENMEIVRWMAPEVLKDf---QFSSKSDVWAYGVLLYEVFS 2071 nematode
Feature 1                        #                                                       
1FGI_A     241 LgGSPYPGv--------pVEELFKLLKe----GHRMDKPSNc-tNELYMMMRD-CWHAvPSQRPTFkQLVEDLD 300  human
1K3A_A     221 LaEQPYQGl--------sNEQVLRFVMe----GGLLDKPDNc-pDMLLELMRM-CWQYnPKMRPSFlEIISSIK 280  human
NP_494971  391 NgQPPYHEl--------kWKEALPRLQnfkdgDNLLVFPKYa-sSEIHAFYSTkVFKRvNEDRVNFeEITSVLD 455  nematode
NP_498153  731 KvGEPYGAcv-------pTSNLCQYLTd----GYVHEKGLHm-sDTIYNIALD-CMRQhPIERPSFaELVDQFL 791  nematode
P83097     694 LgGTPYANav------asNQQLLEAIRa----AVRPAQPAYv-yGDLYQLLLN-CWQLePSERSSCeDVAFGVR 755  fruit fly
XP_973940  626 LgGTPYGNf--------sNNEIPERIIk----GLRLPQMQYf-sDELYQFMLS-CWQIdMDERPDFdVLLESLQ 685  red flour beetle
AAB94183   277 LgGTPFGSlr-------qAQTFIDAMRd----GSAQLDPISycgEAVTQLLAT-CTSHvPEARGDIrTIIKRLE 338  nematode
NP_496123  391 LgKSPYKNvikyderdsyCKYVLAYLNe----GKRLAQPAHa-dAEIYNVMKL-CWDLdMNSRTTFlDCIEFFE 458  nematode
AAC26948  1014 LgGTPYPTc--------vTENILKHIKn----GSRNLQPEYc-pSALYDLMQL-CWRApPQDRPKFsLCSELIE 1073 nematode
T29551    2072 FgEVPYGDk--------dNRRIMTDVRn----GSVLPIPSYcpsKRIYKVIKQ-CLTSdSTKRANFaTILKIFE 2132 nematode

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