2WSM,2HF9,4LPS


Conserved Protein Domain Family
hypB

?
TIGR00073: hypB 
Click on image for an interactive view with Cn3D
hydrogenase accessory protein HypB
A GTP hydrolase for assembly of nickel metallocenter of hydrogenase. A similar protein, ureG, is an accessory protein for urease, which also uses nickel. hits scoring 75 and above are safe as orthologs. [SS 1/05/04 I changed the role_ID and process GO from protein folding to to protein modification, since a protein folding role has not been established, but HypB is implicated in insertion of nickel into the large subunit of NiFe hydrogenases.] [Protein fate, Protein modification and repair]
Statistics
?
PSSM-Id: 272891
Aligned: 9 rows
Threshold Bit Score: 306.632
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
?
Program:
Drawing:
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
2WSM_A         9 DLLAENKRLAEKNREALRESGTVAVNIMGAIGSGKTLLIERTIERIGNEVKIGAMLGDVVSKADYERVRRFGIKAEAIST 88  Archaeoglobus f...
P74218        67 GILSKNDRLAERNRGYFQAKGLLVMNFLSSPGAGKTALIEKMVGDRQKDHPTAVIVGDLATDNDAQRLRSAGAIAIQVTT 146 Synechocystis s...
Q57884        12 DILKANKRLADKNRKLLNKHGVVAFDFMGAIGSGKTLLIEKLIDNLKDKYKIACIAGDVIAKFDAERMEKHGAKVVPLNT 91  Methanocaldococ...
O25560        25 KILSKNDIKAAEMKERYLKEGLYVLNFMSSPGSGKTTMLENLADFKDF--KFCVVEGDLQTNRDADRLRKKGVSAHQITT 102 Helicobacter py...
WP_010871925  12 NLLHANQAGADHNRAHFDEWGITCLNLMSSPGAGKTVLLEKTLAALQSELKMAVIEGDMTTELDADRLRQYGSPVIAINT 91  Synechocystis s...
P24190        83 DVLDKNNRLAERNRARFAARKQLVLNLVSSPGSGKTTLLTETLMRLKDSVPCAVIEGDQQTVNDAARIRATGTPAIQVNT 162 Escherichia coli
2HF9_A        17 DILKANKRLADKNRKLLNKHGVVAFDFMGAIGSGKTLLIEKLIDNLKDKYKIACIAGDVIAKFDAERMEKHGAKVVPLNT 96  Methanocaldococ...
4LPS_A        25 KILSKNDIKAAEMKERYLKEGLYVLNFMSSPGSGKTTMLENLADFKDF--KFCVVEGDLQTNRDADRLRKKGVSAHQITT 102 Helicobacter py...
WP_010876419  12 DILLANRKLARKNQRRLDRANVFAVDFLGAIGSGKTTLIEKLIENMDR--KVAVIAGDVISKFDAGRFEKYDVPVVGLNT 89  Methanothermoba...
2WSM_A        89 GKECHLDAHMIY---HRLKKFS--DC-DLLLIENVGNLICPVDFDLGENYRVVMVSVTEGDDVVEKHPEIFRVADLIVIN 162 Archaeoglobus f...
P74218       147 GNICHLEAEMVA---KAAQKLDldNI-DQLIIENVGNLVCPTTYDLGEDLRVVLFSVTEGEDKPLKYPATFKSAQVILVT 222 Synechocystis s...
Q57884        92 GKECHLDAHLVG---HALEDLNldEI-DLLFIENVGNLICPADFDLGTHKRIVVISTTEGDDTIEKHPGIMKTADLIVIN 167 Methanocaldococ...
O25560       103 GEACHLEASMIEgafDLLKDEGalEKsDFLIIENVGNLVCPSSYNLGAAMNIVLLSVPEGDDKVLKYPTMFMCADAVIIS 182 Helicobacter py...
WP_010871925  92 GRSCHLDAKMVAggiHRLQEDYnpKEfDLVLVENVGNLVCPAEFEVGEHSKVALLSVTEGEDKPLKYPVMFQEADCLLIT 171 Synechocystis s...
P24190       163 GKGCHLDAQMIA---DAAPRLPldDN-GILFIENVGNLVCPASFDLGEKHKVAVLSVTEGEDKPLKYPHMFAAASLMLLN 238 Escherichia coli
2HF9_A        97 GKECHLDAHLVG---HALEDLNldEI-DLLFIENVGNLICPADFDLGTHKRIVVISTTEGDDTIEKHPGIMKTADLIVIN 172 Methanocaldococ...
4LPS_A       103 GEACHLEASMIEgafDLLKDEGalEKsDFLIIENVGNLVCPSSYNLGAAMNIVLLSVPEGDDKVLKYPTMFMCADAVIIS 182 Helicobacter py...
WP_010876419  90 GKECHLDAHLVE---HGLEDLPldDV-DLLFIENVGNLICPVDFDLGSHMRVVVVSSTEGDDTVEKHPLIFREADLVVIN 165 Methanothermoba...
2WSM_A       163 KVALAEAVGADVEKMKADAKLINPRAKIIEMDLKTGKGFEEWIDFLRGILN 213 Archaeoglobus fulgidus DSM 4304
P74218       223 KQDIAAAVDFDAELAWQNLRQVAPQAQIFAVSARTGKGLQSWYEYLDQWQL 273 Synechocystis sp. PCC 6803 substr. Kazusa
Q57884       168 KIDLADAVGADIKKMENDAKRINPDAEVVLLSLKTMEGFDKVLEFIE-KSV 217 Methanocaldococcus jannaschii DSM 2661
O25560       183 KADMVEVFNFRVSQVKEDMQKLKPEAPIFLMSSKDPKSLEDFKNFLLEKKR 233 Helicobacter pylori 26695
WP_010871925 172 KTDLIPHLDIDLEKLAANVRSMNPHVTIIPVSAKTGEGLDTWFSWVKSQVK 222 Synechocystis sp. PCC 6803
P24190       239 KVDLLPYLNFDVEKCIACAREVNPEIEIILISATSGEGMDQWLNWLETQRC 289 Escherichia coli
2HF9_A       173 KIDLADAVGADIKKMENDAKRINPDAEVVLLSLKTMEGFDKVLEFIEKSVK 223 Methanocaldococcus jannaschii
4LPS_A       183 KADMVEVFNFRVSQVKEDMQKLKPEAPIFLMSSKDPKSLEDFKNFLLEKKR 233 Helicobacter pylori 26695
WP_010876419 166 KADLAEAVGADLDKMVDDVKKINPEVRVIKTSLKTGDGVQEIIEAIEGAMA 216 Methanothermobacter thermautotrophicus
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap