Conserved Protein Domain Family
zf-LSD1

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pfam06943: zf-LSD1 
LSD1 zinc finger
This family consists of several plant specific LSD1 zinc finger domains. Arabidopsis lsd1 mutants are hyper-responsive to cell death initiators and fail to limit the extent of cell death. Superoxide is a necessary and sufficient signal for cell death propagation. LSD1 monitors a superoxide-dependent signal and negatively regulates a plant cell death pathway. LSD1 protein contains three zinc finger domains, defined by CxxCxRxxLMYxxGASxVxCxxC. It has been suggested that LSD1 defines a zinc finger protein subclass and that LSD1 regulates transcription, via either repression of a pro-death pathway or activation of an anti-death pathway, in response to signals emanating from cells undergoing pathogen-induced hypersensitive cell death.
Statistics
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PSSM-Id: 462045
Aligned: 77 rows
Threshold Bit Score: 30.5192
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EFN51466      45 CSnaQCRVVLMYPRGAGAVQCSVCG 69 
XP_002526488   7 CS--HCWTPLQLPPGARSIRCSICR 29 
CBI16704      53 CA--HCRTPLQLPAGARSIRCAICQ 75 
XP_006375191   9 CS--KCQTPLQLPPGAESIRCVICQ 31 
XP_010318207   7 CS--KCHTPLQLPPGAKSIRCAICR 29 
XP_009411239   6 CS--HCHTLLQLPSGVSSMRCTICK 28 
XP_006365337   7 CT--NCHTTLQLPSGAQSIRCAICC 29 
XP_006853183   8 CG--NCGVELQFPLDAKSVRCAACH 30 
XP_009389554  31 CS--GCDVLLVVPPQARAIRCAACL 53 
ONI22288       7 CS--NCRTPLQLPPGAESIRCALCQ 29  peach
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