Conserved Protein Domain Family
CYP78

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cd11076: CYP78 
cytochrome P450 family 78
Characterized cytochrome P450 family 78 (CYP78 or Cyp78) proteins include: CYP78A5, which is expressed in leaf, flora and embryo, and has been reported to stimulate plant organ growth in Arabidopsis thaliana and to regulate plant architecture, ripening time, and fruit mass in tomato; Glycine max CYP78A10 that functions in regulating seed size/weight and pod number; and Physcomitrella patens CYP78A27 or CYP78A28, which together, are essential in bud formation. The CYP78 family belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.
Statistics
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PSSM-Id: 410699
Aligned: 16 rows
Threshold Bit Score: 735.675
Created: 17-Sep-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
 
heme bindingputative
Feature 1:heme binding site [chemical binding site]
Evidence:
  • Comment:based on the structure of Salvia miltiorrhiza CYP76AH1 with bound heme (5YM3), defined at 4A contacts

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                             #                      #   #       #       
Q9LMX7        81 KASPLMAFSVGfSRFVISSEPETAKEILSSSAFADRPVKESayELLFHRAMGFA-PYGEYWRNLRRISSTHLFSPRrias 159 thale cress
O65012       111 GAKQLMSFSLGcTPAVITSDPEVARELLTSPHFANRPLKQSaqQLLFGRAIGFA-PNGGYWRLLRRIASAHLFAPRriaa 189 Monterey pine
EES08485      98 SARRLMSLTLGaTPVVISSHPETARDILSGAAFVDRPPKAAarELMFCRAIGFA-PTGEYWRRLRRITGAGMLSPRrmam 176 sorghum
ABU48658      85 GGAAVMSLSVGlTRLVVASRPETAREILVSPAFGDRPVKDAarQLLFHRAMGFApSGDAHWRGLRRASAAHLFGPRrvag 164 Oryza sativa Ja...
Q9FIB0       102 ANTEIMAFSLGsTPVIVASEPNIAREILMSPHFADRPVKQSakSLMFSRAIGFA-PNGTYWRMLRRIASTHLFAPRrila 180 thale cress
XP_002977638 100 HAKELMAFSLGnTRMIITSKPEVARELLNSSEFADRPLKQSaqQLLFGRAIGFA-PYGDYWRNLRRIASNYLFSPRqiaa 178 Selaginella moe...
XP_003517846  85 HAEKLMAFSIGlTRFVISSEPETAKEILGSPGFADRPVKESayQLLFHRAMGFA-PYGEYWRNLRRISALHLFSPKritg 163 soybean
NP_177551     97 KAKALMAFSVGsTRFVITSEPETAKELLNSSAFADRPVKESayELLFDRAMGFA-PFGDYWRELRRISSTHLFSPKrifs 175 thale cress
P48420       106 RAKELMAFSVGdTPAVVSSCPATAREVLAHPSFADRPVKRSarELMFARAIGFA-PNGEYWRRLRRVASTHLFSPRrvas 184 maize
Q7Y1V5       109 RARELMAFSVGeTPAVVSSCPATAREVLAHPSFADRPLKRSarELLFARAIGFA-PSGEYWRLLRRIASTHLFSPRrvaa 187 Japanese rice
Feature 1                                                 #                                      
Q9LMX7       160 FEGVRVGIGMKMVKKIKslvtsdacgevevkkIVHFGSLNNVMTTVFGEsydfd----evngKGCFLERLVSEGYELLGI 235 thale cress
O65012       190 HEAGRQADVVAMLDDIQkeyhskg--vvrvrrHLQGAALNNIMGSVFGRrfdms----heneEVKKLREMVDEGFQLLGA 263 Monterey pine
EES08485     177 LRGLRCRVADSMIQRVAdqmersg--evamraLLQRASLESMVGSVLGLeg---------daVCEELGEMVREGYELVGM 245 sorghum
ABU48658     165 SAPEREAIGARIVGDVAslmsrrg--evplrrVLHAASLGHVMATVFGKrhgd-----isiqDGELLEEMVTEGYDLLGK 237 Oryza sativa Ja...
Q9FIB0       181 HEAGRQLDCAEMVKAVSveqngag--svvlrkHLQLAALNNIMGSVFGRrydpl----aqkeDLDELTSMVREGFELLGA 254 thale cress
XP_002977638 179 HEPSRQAETSRMIEAMStfaadnh-glvrvrdFLQRASLNNIMQTVFGRrfed------gseNAAQLSEMVREGFELLGA 251 Selaginella moe...
XP_003517846 164 SEAFRNEVGLKMVDEVKkvmkdnr--hvevkrILHYGSLNNVMMTVFGKcyef------yegEGVELEALVSEGYELLGV 235 soybean
NP_177551    176 SGESRRKIGQNMVGEIKnamecyg--evhikkILHFGSLNNVMSSVFGKtynfne-givyskESNELEHLVSEGYELLGI 252 thale cress
P48420       185 HEPGRQGDAEAMLRSIAaeqsasg--avalrpHLQAAALNNIMGSVFGTrydvts--gagaaEAEHLKSMVREGFELLGA 260 maize
Q7Y1V5       188 HEPGRQADATAMLSAMAaeqsatg--avvlrpHLQAAALNNIMGSVFGRrydvssssgaaadEAEQLKSMVREGFELLGA 265 Japanese rice
Feature 1                                                                                        
Q9LMX7       236 FNWSDHFWFLRWFDFQGv---RKRCRALVSEVNTFVGGIIEKHKMKKGNnlngeendfv----dvllglqkdEKLSDSDM 308 thale cress
O65012       264 FNWADHLPWLRPLDPLRi---HARCARLVPRVTTFVSNIIEQHRREEQRresgdqcdfv----dvllslqgeDKLDEEDM 336 Monterey pine
EES08485     246 FNLEDHYYKTSWGPLMDlwgvRPMCRELAAMVRGYFGKIIQERRLAGDCheradlls-------ymlslpeeEKLEDSDV 318 sorghum
ABU48658     238 FNWADHLPLLRWLDLQGi---RRRCNRLVQKVEVFVGKIIQEHKAKRAAggvavadgvlgdfvdvlldlqgeEKMSDSDM 314 Oryza sativa Ja...
Q9FIB0       255 FNWSDYLPWLGYFYDSIr--lNQRCSDLVPRIRTLVKKIIDEHRVSNSEkkrdigdfv-----dvllsldgdEKLQEDDM 327 thale cress
XP_002977638 252 FNWADHLPALKAVDPQNi---LQRCAVLVPRVTSFVQNIIDEHRQLDNKaagpdfvd-------vllsldgeDKLNDSDM 321 Selaginella moe...
XP_003517846 236 FNWSDHFPVLGWLDLQGv---RKRCRCLVEKVNAFVGGVIEEHRVKRVRggcvkdegtgd-fvdvlldleneNKLSEADM 311 soybean
NP_177551    253 FNWSDHFPGMRWLDLQGv---RRRCRSLVGRVNVFVGKIINDHKSKRSLrdnpeestydddfvdvllgmhgnSKLSDSDM 329 thale cress
P48420       261 FNWSDHLPWLAHLYDPSn--vTRRCAALVPRVQTFVRGVIDEHRRRRQNsaalndnadf---vdvllslegdEKLGDDDM 335 maize
Q7Y1V5       266 FNWSDHLPWLAHLYDPNh--vARRCAALVPRVQAFVRGVIRDHRLRRDSsstaadnadf---vdvllsleahENLAEDDM 340 Japanese rice
Feature 1              #  ##  ##                                                            #    
Q9LMX7       309 IAVLWEMIFRGTDTVAILVEWVLARMVLHqdIQDKLYREIASATSNnirs-lsdsDIPKLPYLQAIVKETLRLHPPGPlL 387 thale cress
O65012       337 IAVLWEMIFRGTDTTALLTEWTMAELVLHpeAQKKAQAELDAVVGHdrsv--kdsDIPKLPYIQAVVKEALRMHPPGPlL 414 Monterey pine
EES08485     319 IAVLWEMIFRGVDVVAILLEWAMARMSLHpdIQSKAQEEMDAAVGVrrrraitdsDVPNLAFLQWILKETLRMHPPGPlL 398 sorghum
ABU48658     315 IAVLWEMIFRGTDTVAILMEWVMARMVMHpeIQAKAQAEVDAAVGGrrgr-vadgDVASLPYIQSIVKETLRMHPPGPlL 393 Oryza sativa Ja...
Q9FIB0       328 IAVLWEMIFRGTDTTALLTEWTMAELVLNpnVQTKLRDEILTAVGDgadgdvadaDLAKLPYLNAVVKETLRLHPPGPlL 407 thale cress
XP_002977638 322 IAVLWEMIFRGTDTVALLTEWILAELVLHpeIQSKLREEIASVVGGksev--aesDLHKMVYLQAVVKETLRMHPPGPlL 399 Selaginella moe...
XP_003517846 312 IAVLWEMIFRGTDTVAILLEWILARMVLHpdIQAKAQREIDSVCGPyrlv--seaDMPNLRYLQGIVKETLRVHPPGPlL 389 soybean
NP_177551    330 IAVLWEMIFRGTDTVAILLEWILARMVLHpdIQAKAQAEIDCIVGDsgrq-vtdsDLPKLPYVRAIVKETLRMHPPGPlL 408 thale cress
P48420       336 VAILWEMVFRGTDTTALLTEWCMAELVRHpaVQARVRAEVDAAVGAggcp--tdaDVARMPYLQAVVKETLRAHPPGPlL 413 maize
Q7Y1V5       341 VAVLWEMIFRGTDTTALVTEWCMAEVVRNpaVQARLRAEVDAAVGGdgcp--sdgDVARMPYLQAVVKETLRAHPPGPlL 418 Japanese rice
Feature 1        ## #                                                                ####  ##### 
Q9LMX7       388 SWARLAIHDVHVg-pNLVPAGTIAMVNMWSITHNakIWTDPEAFMPERFise----dvSIMGSDLRLAPFGSGRRVCPGK 462 thale cress
O65012       415 SWARLSTEDVNMgdgMCVPAGTTAMVNMWSITHDpnIWESPYEFRPERFvvfeggeevDVRGNDLRLAPFGAGRRVCPGK 494 Monterey pine
EES08485     399 SWARLAVQDARVg-kHVVPAGTTAMVNMWAISHDeaIWGDPWVFRPERFaaaaageevSVLGSDLRLAPFGSGRRVCPGR 477 sorghum
ABU48658     394 SLARLAVHDARVg-gHAVPAGTTAMVNMWAIAHDaaVWPEPDAFRPERFseg---edvGVLGGDLRLAPFGAGRRVCPGR 469 Oryza sativa Ja...
Q9FIB0       408 SWARLSTSDVQLsngMVIPKGTTAMVNMWAITHDqtVWSDPLKFDPERFtgn---admDIRGGDLRLAPFGAGRRVCPGK 484 thale cress
XP_002977638 400 SWARLAIHDVTLa-gHHVPAGTTAMVNMWSITHDpsIWSEPEKFSPERFleq----dvDVKGTDLRLAPFGAGRRVCPGR 474 Selaginella moe...
XP_003517846 390 SWARLAVHDVTVggkHVIPKGTTAMVNMWAITHDerFWAEPERFRPERFvee---edvNIMGSDLRLAPFGSGRRVCPGK 466 soybean
NP_177551    409 SWARLSIHDTQIg-tHFIPAGTTAMVNMWAITHDekVWPEAHEYKPERFlgaqesnnfPIMGSDLRLAPFGAGRRVCPGK 487 thale cress
P48420       414 SWARLATADVPLcngMVVPAGTTAMVNMWAITHDaaVWADPDAFAPERFlpseggadvDVRGVDLRLAPFGAGRRVCPGK 493 maize
Q7Y1V5       419 SWARLATADVGLangMVVPAGTTAMVNMWAITHDgeVWADPEAFAPERFipseggadvDVRGGDLRLAPFGAGRRVCPGK 498 Japanese rice
Feature 1         ##                                          
Q9LMX7       463 AMGLATVHLWIGQLIQNFEWv--kGSCDVELAEVLKlSMEMKNPL 505 thale cress
O65012       495 ALGLATVNLWVAKLLHHFEWlp-hAEHPVDLSEVLKlSCEMARPL 538 Monterey pine
EES08485     478 MMGLATAQLWLGRLLQEYRWlpppANKPVELAECLRlSMEMKTPL 522 sorghum
ABU48658     470 MLALATAHLWLAQLLHAFDWs--pTAAGVDLSERLGmSLEMAAPL 512 Oryza sativa Japonica Group
Q9FIB0       485 NMGLATVTRWVAELVRRFEWgq-dQTEPVDLGEVLKlSCEMEHPL 528 thale cress
XP_002977638 475 ALGLATVLLWTARLVHKFEFqv-dPAHPVDLTEVLKlSSEMAAPL 518 Selaginella moellendorffii
XP_003517846 467 ALGLASVHLWLAQLLQNFHWvq-fDGVSVELDECLKlSMEMKKPL 510 soybean
NP_177551    488 SMGLATVELWLAQLLGSYKWv---SCGEVDLSETLKlSLEMKNTL 529 thale cress
P48420       494 NLGLTTVGLWVARLVHAFQWalpdGAAAVCLDEVLKlSLEMKTPL 538 maize
Q7Y1V5       499 NLGLATVTLWVARLVHAFDWflpdGSPPVSLDEVLKlSLEMKTPL 543 Japanese rice

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