1YOC


Conserved Protein Domain Family
DUF4442

?
pfam14539: DUF4442 
Click on image for an interactive view with Cn3D
Domain of unknown function (DUF4442)
This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 139 and 165 amino acids in length. There is a conserved PYF sequence motif. There is a single completely conserved residue N that may be functionally important.
Statistics
?
PSSM-Id: 434027
Aligned: 32 rows
Threshold Bit Score: 131.226
Created: 25-Mar-2022
Updated: 17-Oct-2022
Structure
?
Program:
Drawing:
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
1YOC_B           15 PAQFSAMIGQFAPYFASIAPQFVELRPG--YAEVTFPKRREVLNHIGTVHAIALCNAAELAAGTMTDASIPA---GHRWI 89  Pseudomonas ...
KJE89632         63 RELISTLMGILSTYTGSVSPFIAQVDAT--ETLVQLTERPWLRNPFTSIHALAIANAAELASGLLATRATEHf--GGRVI 138
tigr:MSMEG_1433 115 TRLFSAAAVARVPYFASIVPHVVHMEPG--RAEVTVPKWFLVHNHLHTVHAIASCNAAEMAMGMLMEATVPS---THRWI 189
WP_005518361     22 RALFSLGMCVRVPYFATVLPTVDRLEPG--HCEVTAPKWWGVHNHIGTFHAIAACNLAEAAMGMLAEATVPV---GHRWI 96  Rhodococcus ...
Q5Z1W6           23 HALFSLGMVARVPYFGTVLPTVVRLEPG--LCEVSAPKWFGIRNHLGTFHAIAACNLAEVAMGMLSEATVPT---THRWI 97  Nocardia far...
CHGC:AMES_7847   20 KQLFSAAMCLRVPYFRTVLPSVRELRPG--HCEVTAPKWWGVYNHIRTFHAIAACNLAEIAMGMLAEATVPT---THRWL 94 
jgi:Cwoe_0892    20 RSIFSQGYRFAAPYFRTIPARVESVEPG--LAVAQMWHAPWVRNHLGGVHAIALCNLAELTMGAAAEATVPG---THRWI 94 
CAN93699         23 TRAQSVLFQRMVPFTGTAGIQFDEVSSD--RVALRLANGRRVRNHIGGVHAAAAGLLAETATGFVVAVNLPD---DKLPL 97 
jgi:Ndas_5294     9 AEAVKAGFLAAVPFVRTLGLTFTELDHG--RAVMRLPDNADHHNHVGGPHAGAMFTLAESASGAIIIGTFGDqldRAVPL 86 
Q5E6P0            7 pKIVKRALN-IWPPFWGAGISIENISSDfqEVSVILKDRFWNRNANRTQYGGSIFSMTDPVFSLMLMGILRD---EYYVW 82  Aliivibrio f...
1YOC_B           90 PRGMTVEYLAKATGDVRAVADGS-Q--------IDW------------QA-----T-GNLVVPVVAYVDDK-PV-FRAEI 140 Pseudomonas ...
KJE89632        139 VTNISVAYDRKARGVISCHAQLT-P--------EQVrqvesmassaqaGKp---vD-ESLVIQVNVLDSKKeIV-SRLQA 204
tigr:MSMEG_1433 190 PKGMTVSYLAKATTSLRATARLT-P--------PDFts---------iTE-----G-ADVVVPVSVTDRRGvEV-VHADI 244
WP_005518361     97 PKAMNVRYLAKAQSRLRATATLD-Rip----dfDTV------------TE-----G-TELTIPVSIRDRAGtEV-VHADI 152 Rhodococcus ...
Q5Z1W6           98 PKAMNVRYLTKAETGLRAVARLP-Rip----dfAAI------------TE-----G-TELVVPVAIYDKHGvEV-VHADI 153 Nocardia far...
CHGC:AMES_7847   95 PKGMTVRYVAKAETGLRAVAALP-El-------PEF------------GE-----DgFDLDVPVTISDTNGrPV-VTGTI 148
jgi:Cwoe_0892    95 PQGMEVEYRAKAHGRMRATARIElP--------EPL------------VE-----R-QQVAVAIAIADRAGtEV-LSGTI 147
CAN93699         98 LRSMKIDYKRRAQGGLRAVATLT-P--------EQR------------QSfldqpK-GDVAVAVTVTDESGaSP-MECEF 154
jgi:Ndas_5294    87 PTTSTIDFLKIATGDLTAEAVLG-RpreeiiaeLDE------------GR-----R-PEFPIDVELRTEDG-TVtGRMSI 146
Q5E6P0           83 DKQSEIDFISPGTTDLHARFVIS-D--------EQLaeikq---etkeGE-----K-HFPQFEVYIYDKKGkVV-ARVNR 143 Aliivibrio f...
1YOC_B          141 TM-YV 144 Pseudomonas aeruginosa PAO1
KJE89632        205 TW-VV 208
tigr:MSMEG_1433 245 TT-WV 248
WP_005518361    153 TV-WV 156 Rhodococcus hoagii
Q5Z1W6          154 TT-WV 157 Nocardia farcinica
CHGC:AMES_7847  149 TI-WV 152
jgi:Cwoe_0892   148 RI-WV 151
CAN93699        155 VWaWV 159
jgi:Ndas_5294   147 TW-TL 150
Q5E6P0          144 TL-YV 147 Aliivibrio fischeri ES114
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap