3NE2,1FQY,1YMG,1FX8,1RC2


Conserved Protein Domain Family
MIP

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TIGR00861: MIP 
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MIP family channel proteins
1.A.8 The Major Intrinsic Protein (MIP) FamilyThe MIP family is large and diverse, possessing over 100 members that all form transmembrane channels. These channel proteins function in water, smallcarbohydrate (e.g., glycerol), urea, NH3, CO2 and possibly ion transport by an energy independent mechanism. They are found ubiquitously in bacteria, archaeaand eukaryotes. The MIP family contains two major groups of channels: aquaporins and glycerol facilitators.The known aquaporins cluster loosely together as do the known glycerol facilitators. MIP family proteins are believed to form aqueous pores that selectively allow passive transport of their solute(s) across the membrane with minimal apparent recognition. Aquaporins selectively transport water (but not glycerol) while glycerol facilitators selectively transport glycerol but not water. Some aquaporins can transport NH3 and CO2. Glycerol facilitators function as solute nonspecific channels, and may transport glycerol, dihydroxyacetone, propanediol, urea and other small neutral molecules in physiologically importantprocesses. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes. [Transport and binding proteins, Unknown substrate]
Statistics
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PSSM-Id: 273306
Aligned: 19 rows
Threshold Bit Score: 167.476
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3NE2_A  11 AEVVGTFILVFFGPGAAVITLMIAngadkpnefniGIGALGGLg----DWFAIGMAFALAIAAVIYSLGRISGAHINPAV 86  Archaeoglobus fulgidus
P26587  28 AEFLSTFVFVFAAEGSILSLDKLY-----------WEHAAHAGtntpgGLILVALAHAFALFAAVSAAINVSGGHVNPAV 96  thale cress
P29972  16 AEFLATTLFVFISIGSALGF----------------KYPVGNNqtavqDNVKVSLAFGLSIATLAQSVGHISGAHLNPAV 79  human
P06624  15 AEFFASLFYVFFGLGASL------------------RWAPGp-----lHVLQVALAFGLALATLVQAVGHISGAHVNPAV 71  cattle
P25794  59 AEFIATFLFLYITVLTVMGVVRESs----------KCKTVG--------IQGIAWAFGGMIFALVYCTAGISGGHINPAV 120 pea
P23645  70 SECLASFMYVFIVCGAAAG------------------VGVGasv--ssVLLATALASGLAMATLTQCFLHISGAHINPAV 129 fruit fly
P08995  42 AEAVGTYFLIFAGCASLVVNEN--------------YYNMi-------TFPGIAIVWGLVLTVLVYTVGHISGGHFNPAV 100 soybean
P53386  54 GEFCGTFMFLWCAYVICNVANHDv-----------ALVAAPDGsh-pgQLIMIAIGFGFSVMFSIWCFAGVSGGALNPAV 121 baker's yeast
1FQY_A  16 AEFLATTLFVFISIGSALGFKYPV-----------GNNQTAVQ-----DNVKVSLAFGLSIATLAQSVGHISGAHLNPAV 79  human
1YMG_A  15 AEFFASLFYVFFGLGASL------------------RWAPGPL-----HVLQVALAFGLALATLVQAVGHISGAHVNPAV 71  cattle
3NE2_A  87 TIALWSIGRFPGREVVPYIVAQFIGAALGSLLFLACVG----PAAATVGg---lGatapfpgIGYGQAILTEAIGTFLLM 159 Archaeoglobus fulgidus
P26587  97 TFGALVGGRVTAIRAIYYWIAQLLGAILACLLLRLTTNgmrpVGFRLAS-----G-------VGAVNGLVLEIILTFGLV 164 thale cress
P29972  80 TLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSsltgNSLGRNDla--dG-------VNSGQGLGIEIIGTLQLV 150 human
P06624  72 TFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPpavrGNLALNTlh--pG-------VSVGQATIVEIFLTLQFV 142 cattle
P25794 121 TFGLFLARKLSLTRAIFYMVMQVLGAICGAGVVKGFEGkqrfGDLNGGAnfvapG-------YTKGDGLGAEIVGTFILV 193 pea
P23645 130 TLALCVVRSISPIRAAMYITAQCGGGIAGAALLYGVTVpgyqGNLQAAIsh-saA-------LAAWERFGVEFILTFLVV 201 fruit fly
P08995 101 TIAFASTRRFPLIQVPAYVVAQLLGSILASGTLRLLFMg--nHD-QFSGtv-pnG--------TNLQAFVFEFIMTFFLM 168 soybean
P53386 122 SLSLCLARAVSPTRCVVMWVSQIVAGMAAGGAASAMTP----GEVLFANsl-glG-------CSRTRGLFLEMFGTAILC 189 baker's yeast
1FQY_A  80 TLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSsltgNSLGRNDla--dG-------VNSGQGLGIEIIGTLQLV 150 human
1YMG_A  72 TFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPpavrGNLALNTlh--pG-------VSVGQATIVEIFLTLQFV 142 cattle
3NE2_A 160 LVIMGVA--VDERAPPG---FAGLVIGLTVGGIITTIGNITGSSLNPARTFGPYLGDSl-mGINLwqyFPIYVIGPIVGA 233 Archaeoglobus fulgidus
P26587 165 YVVYSTLi-DPKRGSLGi--IAPLAIGLIVGANILVGGPFSGASMNPARAFGPALVGW---RWHD---HWIYWVGPFIGS 235 thale cress
P29972 151 LCVLATTd-RRRRD-LGg--SAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVITH---NFSN---HWIFWVGPFIGG 220 human
P06624 143 LCIFATYd-ERRNG-RLg--SVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTR---NFTN---HWVYWVGPVIGA 212 cattle
P25794 194 YTVFSATdaKRSARDSHvpiLAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVFNkkiGWND---HWIFWVGPFIGA 270 pea
P23645 202 LCYFVSTd-PMKK--FMg--NSAASIGCAYSACCFVSMPY----LNPARSLGPSFVLN---KWDS---HWVYWFGPLVGG 266 fruit fly
P08995 169 FVICGVAt-DNRA--VGe--FAGIAIGSTLLLNVIIGGPVTGASMNPARSLGPAFVHG---EYEG---IWIYLLAPVVGA 237 soybean
P53386 190 LTVLMTAveKRETNf-----MAALPIGISLFIAHVALTAYTGTGVNPARSLGAAVAAR---YFPHy--HWIYWIGPLLGS 259 baker's yeast
1FQY_A 151 LCVLATTd--RRRRDLGg--SAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVITH---NFSN---HWIFWVGPFIGG 220 human
1YMG_A 143 LCIFATYd-ERRNG-RLg--SVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTR---NFTN---HWVYWVGPVIGA 212 cattle
3NE2_A 234 VAAAWLY 240 Archaeoglobus fulgidus
P26587 236 ALAALIY 242 thale cress
P29972 221 ALAVLIY 227 human
P06624 213 GLGSLLY 219 cattle
P25794 271 ALAALYH 277 pea
P23645 267 MASGLVY 273 fruit fly
P08995 238 IAGAWVY 244 soybean
P53386 260 ILAWSVW 266 baker's yeast
1FQY_A 221 ALAVLIY 227 human
1YMG_A 213 GLGSLLY 219 cattle
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