Conserved Protein Domain Family
F-box_AtFBW1-like

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cd22157: F-box_AtFBW1-like 
F-box domain found in Arabidopsis thaliana F-box/WD-40 repeat-containing protein 1 (AtFBW1) and similar proteins
AtFBW1, also called WD-40-associated F-box protein 1, is an F-box protein that contains four WD-40 repeats, which are separated from each other by a spacer region. Like other F-box proteins, AtFBW1 may be a component of SCF (Skp1 Cdc53 F-box protein) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins. This subfamily also contains many F-box only proteins that do not have any WD repeat. The F-box domain has a role in mediating protein-protein interactions in a variety of contexts, such as polyubiquitination, transcription elongation, centromere binding and translational repression.
Statistics
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PSSM-Id: 438928
Aligned: 37 rows
Threshold Bit Score: 53.2345
Created: 30-Jun-2020
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
putative Skp1
Feature 1:putative Skp1 binding site [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          #   #  ##  ##   # ##    ### #         
Q4PSN6        36 SLLPfELFEEILCRVPTKSLLRLKL-TCKRWLALFNDKRF 74  thale cress
XP_022008543   3 DVIHdDVVEQILIRLDVNDLIRFKT-VCKSWHSLITSPGF 41  common sunflower
PNR26553      22 KSLPeDLMERVLAWLPIHSLFRMRC-VCKQWNSILFSERF 60  Physcomitrella patens
VDP38162       4 EELPvDLVREVLLRVDGRTLIVFCQlVCKKWHSVIDDVGF 43  Soboliphyme baturini
PNR28646      34 SSLPdDVLDRVIARLPLQYLIRMQS-VCKKWKIKLRTSSF 72  Physcomitrella patens
Q9SMZ3        68 DDLNdDVLERVLSWLPTSCFFRMSS-VCKRWKSSQTSKSF 106 thale cress
WP_143046000  24 YDLHeDILERVLARIPTSSLFQFRS-VCKGWSSLINSPSF 62  Acinetobacter baumannii
PNR34803      76 LGLPdDAMTLVFARLPRQSLAMTRL-VCSSWKRVAERQEL 114 Physcomitrella patens
VDC58457       2 ESLTdDLWTMVLARLPIKSFTCFKL-VCKQWKSIVESPFF 40  field mustard
Q8GRM6        23 GILPlEVLFDVLVRLPAKELCRLRI-VCRPWRSLTSDPLF 61  Japanese rice

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