3MD7


Conserved Protein Domain Family
metallo-hydrolase-like_MBL-fold

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cd16279: metallo-hydrolase-like_MBL-fold 
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uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo
Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) for which this fold was named perform only a small fraction of the activities included in this superfamily.Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry. Some members of this subgroup are named as octanoyltransferase (also known as lipoate-protein ligase B).
Statistics
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PSSM-Id: 293837
Aligned: 186 rows
Threshold Bit Score: 129.901
Created: 4-Sep-2015
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 11 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:
  • Structure:3MD7: Brucella Melitensis uncharacterized MBL-fold metallo-hydrolase superfamily protein binds two Mn ions and guanosine monophosphate

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1               #                                                                   ##
3MD7_A     29 LRFTLLGCGSSPGVPringdwgkcdpknPKNRRRRASLLVERYdaegnnTVVVIDTGPDFRMQMIdsgvHMLDAAVYTHP 108 Brucella melitensi...
KIC74602    5 GKFLFFGTGSSLGVPvigcecavcrsesPYNKRLRSSGLIKIHd-----KQIVIDCGPDFRTQMLhhhiKQIDGLILTHA 79  Neochlamydia sp. EPS4
CDR34955    3 STFLFLGTGGSLGVPvvgcscpiclshdKKNKRLRSSALITTRn-----KKFLIDCGPDFRQQALihgiNSIDGCLITHI 77  Criblamydia sequan...
KIC71612    3 GKLLFLGTGASMGIPvlgcgcevchsssSFNQRLRPSALVKTHf-----KQFLIDVGPDFRLQALrhriHALDGVILTHA 77  Candidatus Protoch...
CCB88585    3 AAALFLGTGASMGIPvigcdcavcnsslPANKRLRPSLLLTVGd-----KRYVVDIGPDFRTQALqhqiDRLDGVIITHS 77  Simkania negevensis Z
CDZ80522    3 AKLTFLGTGASLGVPvigcecpvclstnKKNKRTRSSVLIEGLn-----KTLLIDCGPDFRMQALnqslKKIDGLILTHA 77  Chlamydia sp. 'Rubis'
CCB91705    2 GSLTFLGTGGSMGVPiigcrcpvclskdEKNKRTRPSAFLKAKg-----KAIVIDAGPDFRTQALreeiSHIDGVIFTHA 76  Waddlia chondrophi...
NP_224675  11 GKLVFLGTGNPEGIPvpfcsc--rvcqnTGIHRLRSSVLIQYQn-----KTLVIDAGPDFRTQMLvagvSELDGVFLTHP 83  Chlamydophila pneu...
EKE21039    2 SEIIFLGTGPSTGVPviacscktcksksRYNKRLRPSILIRHNk-----KNILVDAGPDIRQQALkykiKKVDALIITHS 76  uncultured bacterium
AIA30322    1 MEVLFMGTGASTGVPmigcdcsvcqssdPKNERTRSSIMVRVDg-----KNILVDTSPDLRIQSLk---NHIKRIDAVIF 72  Leptospirillum fer...
Feature 1     ######                                                                          
3MD7_A    109 HADHIHGIDDLRtyvv---dngrLMDVYANrltrnrlydtfg-ycfetpvgssypPILSMHDIAp---ETPFSIEga-gg 180 Brucella melitensi...
KIC74602   80 HYDHTGGFDELRilna---rskqPIPCLLAeataeelkmrf----pyafdktsstEKLTTRSVLhylkSERGKVNf---l 149 Neochlamydia sp. EPS4
CDR34955   78 HHDHTASIDELRvftf---tnkkSLPCLMSpetasdirrrfdylfleserekrslSILDIHELP----KKSGKINf---e 147 Criblamydia sequan...
KIC71612   78 HQDHTAGIDDLRpiyy---kritPLPILLSeitridiqqryh--ylfatekkdfiQRLHLQTLPsl-iEGSVTFE----- 146 Candidatus Protoch...
CCB88585   78 HYDHIAGLDELRiyff---rekiPVPCLVSpetleeikiryhyimppsqedvshvMKFDFQVLEg--hEGETTFE----- 147 Simkania negevensis Z
CDZ80522   78 HFDHIGGMDDLRalrl---qnakSLPTLLSketgdnlkqcfh--ymfeeknnmftSKLDFQWIN----NKYGKCNf---i 145 Chlamydia sp. 'Rubis'
CCB91705   77 HHDHTAGLDDLRvfti---rrsnPIPCLLSektandlkrryd-yifreggesklvSKVELQILE----EERGETHf---l 145 Waddlia chondrophi...
NP_224675  84 HYDHIGGIDDLRawyi---vtqrSLPLVLSastyrflnk--------akeylfatPNVESSLPA----VLEFTILnedcg 148 Chlamydophila pneu...
EKE21039   77 HFDHIAGIDDLRiynr---kkkkAIDCFLLketyeelkvkyehlftrnldghtksAKFVFHILDd--qKDHFKFA----- 146 uncultured bacterium
AIA30322   73 THPHADHILGIDelrtfnfwqkeEIPVFADpetlgtvmkm-----fpyafseenrGGLTRPRLApreiVGAMKIN----- 142 Leptospirillum fer...
Feature 1                   #                  #                      
3MD7_A    181 AIRFEPFSQV----HGDIe-SLGFRIGSVVYCTDVsaFPEQSLQYIKDADVLIIGA 231 Brucella melitensis biovar Abortus 2308
KIC74602  150 GLPIHYVTYQ----QGGMl-VNGFKVGNFAYISDIrhYPQTIFEDLQGVETLVVSC 200 Neochlamydia sp. EPS4
CDR34955  148 GVEVIYVGYEq---SGTS--VTGYRFGDLSYISDIkiYDEDIFDFLKGTKILIVSA 198 Criblamydia sequanensis CRIB-18
KIC71612  147 GTSINYMTYE----QGGMa-VNGFRFGDLAYLSDIrtFPQTIFTQLQDLKILVISA 197 Candidatus Protochlamydia amoebophila
CCB88585  148 GLSLRYFSYFq---KGMK--VTGIRIKDFAYVVDIleYPESIYKQLEGVQTLVIDG 198 Simkania negevensis Z
CDZ80522  146 NIPITYLTFK----QTYMn-VNGFVFGNLAFITDVkyYEEDIFNYLQEIDILIVSA 196 Chlamydia sp. 'Rubis'
CCB91705  146 DISFRYLSYIq---SGML--VNGFKVGNLAFITDIknFSETIYDDLQGTKVLVVSA 196 Waddlia chondrophila 2032/99
NP_224675 149 QEEFQGIPYTyvsyYQKSchVTGFRFGNLAYLTDLcsYDAKIFSYLDNVETLILSA 204 Chlamydophila pneumoniae CWL029
EKE21039  147 GITFNYFSFFq---DSKK--VLGIRLNNIAYVTDIkrYDKKKLDEINNLDFLILSC 197 uncultured bacterium
AIA30322  143 EIQVTPFPVK----HGPVy-NHALRLDDLVYLTDCneVSDEGMEVMKGVDTLIIGA 193 Leptospirillum ferriphilum YSK

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