4J2C


Conserved Protein Domain Family
Syntaxin-6_N

?
pfam09177: Syntaxin-6_N 
Syntaxin 6, N-terminal
Members of this family, which are found in the amino terminus of various SNARE proteins, adopt a structure consisting of an antiparallel three-helix bundle. Their exact function has not been determined, though it is known that they regulate the SNARE motif, as well as mediate various protein-protein interactions involved in membrane-transport.
Statistics
?
PSSM-Id: 462706
Aligned: 139 rows
Threshold Bit Score: 51.0268
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
4J2C_A         5 DPFFVVKGEVQKAVNTAQGLFQRWtellqdpstatREEIDWTTNELRNNLRSIEWDLEDLDETISIVEANPRKFNLDATE 84 
Q8S4W5         5 DPFYLIRQEIQDSVNELQQRMSRFhgl-----tatNPERKKIAQTVEEGCGSLSWQLNELDTAVDRASENPQRFNLTPEE 79  Chlamydomonas r...
XP_002973834   7 DPFYYIKDQLDELVGGLNSSYLRWqgl------paSLERDGIAKQLVEKCGSIERQVDELDRAITVAERNPAKFRVGPAE 80 
XP_015625156   6 DPFYIVREEIQDSIDKLQTTFHRWekt-----psnTGEHVHLTKELHTSCESIEWQVDELEKTILVASRDPAYYGLDEVE 80 
KRH14393       6 DPFYVVKQEIQESIDKLQSTFHQWekt------adAGERSNLSKEVLGSCESIEWQVDELDKAISVASRDPSWYGIDEVE 79 
KRG98757       6 DPFYVVKAEIQDSIDKLQSTFHQWesk------sgAAEQGHLTKEVLAGCESIEWQVDELDKAIAIASRDPSWYGIDEAE 79 
XP_006342586   6 DPFYIVKEEIQESIDKLLSTFHQWeqt-----sagSSEQVHLTKELLASSESIEWQVDELDKTIDVAARDPSWYGINDIE 80 
XP_002305773   6 DPFYIVKEEIQESIDKLQSSFHQWeri-----ssdSGEQVRLTKELLAACESIEWQVDELDKAISVAARDPSWYGIDEAE 80 
XP_009113657   6 DPFYIVKEEIQDSIDKLQSAFHKWeri-----spgMGDQVHATKELLANCGSIEWQVDELEKAITVAAKDPALYGIDEAE 80 
THU51031       6 DPFYIVKEEIQGSIDKLQASFRQWeqt-----sldIGERVRLTKELLASCESLDWQVDELDKAIAVAAKDPARYSLDETE 80  Balbis banana
4J2C_A        85 LSIRKAFITSTRQVVRDMK 103
Q8S4W5        80 LSSRRRWITNTRRQLDGMK 98  Chlamydomonas reinhardtii
XP_002973834  81 IEQRRRWTTQTRSKIGGIK 99 
XP_015625156  81 LSRRRNWIGSARNQVAAVR 99 
KRH14393      80 VENRRKWTSDARTQVSTAK 98 
KRG98757      80 VESRRRWTSNTRSQVGTMK 98 
XP_006342586  81 LDKRRRWTSNARAQVGSMK 99 
XP_002305773  81 LEKRRRWTSTARTQVGNVK 99 
XP_009113657  81 LERRRRWTSNARTQVRNVK 99 
THU51031      81 LGKRRKWTSIARKQACFlr 99  Balbis banana
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap