Conserved Protein Domain Family
CYCLIN_AtCycU-like
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cd20604: CYCLIN_AtCycU-like 
cyclin box found in Arabidopsis thaliana U-type cyclins (CycUs) and similar proteins
CycUs interact with cyclin-dependent kinase A-1 (CDKA-1) to trigger its kinase activity. CycUs contain one cyclin box. The cyclin box is a protein binding domain.
Links
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Statistics
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PSSM-Id: 410307
Aligned: 10 rows
Threshold Bit Score: 214.562
Created: 11-Jul-2019
Updated: 25-Oct-2021
Structure
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Aligned Rows:
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putative CDKU-type cyclin
Feature 1:putative CDK interface [polypeptide binding site]
Evidence:
  • Comment:based on the structure of Saccharomyces cerevisiae cyclin Pho80 in complex with cyclin-dependent protein kinase Pho85 (2PK9), defined at 4A contacts
Scroll to Sequence Alignment Display
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Feature 1                                    # #                                      ####### ###
Q9LJ45        55 SLEAFHGVRaPSISIAKYLERIYKYTkCSPACFVVGYVYIDRLAHKHPgslVVSLNVHRLLVTCVMIAAKILDDVHYNNE 134 thale cress
O80513        40 RVSVFHGLSrPTITIQSYLERIFKYAnCSPSCFVVAYVYLDRFTHRQPslpINSFNVHRLLITSVMVAAKFLDDLYYNNA 119 thale cress
Q9M205        63 KTQIFDCREiPDMTIQSYLGRIFRYTkAGPSVYVVAYVYIDRFCQTNPgfrISLTNVHRLLITTIMIASKYVEDLNYRNS 142 thale cress
XP_024363912 102 KLTIFHGLRaPSINIAKYLERIFKYTnCSPSCFVVGYVYLDRLIHRQPdllVTSLNVHRLLVTSVMVATKMLDDVHFNNA 181 Physcomitrella ...
Q8LB60        61 SVTVFDGRSpPEISIAHYLDRIFKYScCSPSCFVIAHIYIDHFLHKTRa-lLKPLNVHRLIITTVMLAAKVFDDRYFNNA 139 thale cress
AAC32127      96 FVTVFHGVRtPGISIAKYLERVYKYTsCSPSCFVVAYIYIDRLVHRQPnfpVISLNIHRLLLTSLMIAAKMLDDAHYNNA 175 Picea mariana
Q9LY16        50 RISAFNAVTkPSISIRSYMERIFKYAdCSDSCYIVAYIYLDRFIQKQPllpIDSSNVHRLIITSVLVSAKFMDDLCYNNA 129 thale cress
EFJ13733      32 KLTVFHGLRaPSISIEKYLERIFKYAnCSPACFVVAYAYMDRFIHQQPdvpITSLNVHRLLITSVMVAAKFLDDAYYNNA 111 Selaginella moe...
Q9FKF6        48 KPSSFTGVTkPSISIRSYLERIFEYAnCSYSCYIVAYIYLDRFVKKQPflpINSFNVHRLIITSVLVSAKFMDDLSYNNE 127 thale cress
Q9SHD3        57 KTRVFDCREiPDMTIQSYLERIFRYTkAGPSVYVVAYVYIDRFCQNNQgfrISLTNVHRLLITTIMIASKYVEDMNYKNS 136 thale cress

Feature 1                     #  ##  ##  #######               
Q9LJ45       135 FYARVGGVsNADLNKMELELLFLLDFRVTVSfRVFESYCFHLEKEM 180 thale cress
O80513       120 YYAKVGGIsTKEMNFLELDFLFGLGFELNVTpNTFNAYFSYLQKEM 165 thale cress
Q9M205       143 YFAKVGGLeTEDLNKLELEFLFLMGFKLHVNvSVFESYCCHLEREV 188 thale cress
XP_024363912 182 FFARVGGVsVVELNRLELEFLFRLDFKLSVTiSVFESYCSYLERDI 227 Physcomitrella patens
Q8LB60       140 YYARVGGVtTRELNRLEMELLFTLDFKLQVDpQTFHTHCCQLEKQN 185 thale cress
AAC32127     176 FYARVGGVsIAELNRLEVDFLFRLDFRLKVTaSVFESYCLHLEKEM 221 Picea mariana
Q9LY16       130 FYAKVGGItTEEMNLLELDFLFGIGFQLNVTiSTYNDYCSSLQREM 175 thale cress
EFJ13733     112 YYAKVGGVsTLEMNRLELQFLFRLDFRLQVTvTMFESYCSHLEREV 157 Selaginella moellendorffii
Q9FKF6       128 YYAKVGGIsREEMNMLELDFLFGIGFELNVTvSTFNNYCCFLQREM 173 thale cress
Q9SHD3       137 YFAKVGGLeTEDLNNLELEFLFLMGFKLHVNvSVFESYCCHLEREV 182 thale cress

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