Conserved Protein Domain Family
FH_FOXC1

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cd20044: FH_FOXC1 
Forkhead (FH) domain found in Forkhead box protein C1 (FOXC1) and similar proteins
FOXC1, also called Forkhead-related protein FKHL7, or Forkhead-related transcription factor 3 (FREAC-3), is a DNA-binding transcriptional factor that plays a role in a broad range of cellular and developmental processes such as the development of the eyes, bones, cardiovascular system, kidneys, and skin. The FH domain is a winged helix DNA-binding domain. FOX transcription factors recognize the core sequence 5'-(A/C)AA(C/T)A-3'.
Statistics
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PSSM-Id: 410818
Aligned: 5 rows
Threshold Bit Score: 198.387
Created: 18-Dec-2018
Updated: 25-Oct-2021
Structure
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Aligned Rows:
 
putative DNA
Feature 1:putative DNA binding site [nucleic acid binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                  #                 ##  #                  ## ##  #      #         ### #
Q12948        73 PKDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYW 152 human
XP_007887802  66 PKDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMERFPFYRENKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYW 145 elephant shark
Q68F77        74 PKDMVKPPYSYIALITMAIQNAPEKKITLNGIYQFIMERFPFYRDNKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYW 153 tropical clawed...
Q9DE25        69 PKDMVKPPYSYIALITMAIQNSPDKKVTLNGIYQFIMERFPFYRDNKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYW 148 zebrafish
Q9DE24        69 PKDMVKPPYSYIALITMAIQNSSDKKITLNGIYQFIMERFPFYRDNKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYW 148 zebrafish
Feature 1                     
Q12948       153 TLDPDSYNMFENG 165 human
XP_007887802 146 TLDPDSYNMFENG 158 elephant shark
Q68F77       154 TLDPDSYNMFENG 166 tropical clawed frog
Q9DE25       149 TLDPDSYNMFENG 161 zebrafish
Q9DE24       149 TLDPDSYNMFENG 161 zebrafish

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