Conserved Protein Domain Family
SVIP

?
pfam15811: SVIP 
Small VCP/p97-interacting protein
SVIP, small VCP/p97-interacting protein, is a family of proteins found in eukaryotes. SVIP was identified by yeast two-hybrid screening to be an interactive partner of VCP/p97. Mammalian VCP/p97 and its yeast counterpart Cdc48p participate in the formation of organelles, including the endoplasmic reticulum (ER), Golgi apparatus, and nuclear envelope. Over-expression of SVIP caused the formation of large vacuoles that seemed to be derived from the ER. The family has two putative coiled-coil regions and contains proteins of approximately 80 amino acids in length.
Statistics
?
PSSM-Id: 464888
Aligned: 27 rows
Threshold Bit Score: 26.9493
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
XP_002407863        1 MG-IFASCF--KGSNDDVpsSTGPDA-VLKRQQMAEAAEKRLKEQESRGVKDPEKLRRQQQRQAELDKELGAAERSPn-D 75 
Q3UZP4              1 MG-LCFPCP--AESAPPS-----PSP-EEKREKLAEAAERRQKEAATRGILDIQSVEAKKKKKEQLEKQMATSGPPT--A 69  house mouse
XP_002755165        1 MG-LCFPCP--GESAPPT-----PDL-EEKRAKLAEAAERRQKEAASRGILDVQSVQEKRKKKEKMEKQIATSGPPP--E 69 
XP_018672979        1 MGsLFSCCL--GNDYE------TPDP-EVRRQQMLEAAERRKQEYENRGLKDPEGVKAKQRKREAAEKSQEQIGSNE--- 68 
jgi:MICPUN_109194   1 MG-----CC--GSKGQYA--VEEPGAyEARREKMLEAADRRNAQSAMRGIQNPRSAARLREEQSKPARTSEFQARKDeqm 71 
CDS40553            1 MG----CCF--SKPSEAD--RHQPSV-EERRRLQAEAAERRREEAAIRGIVNPASVRRHQKLTTAENMRLSDDVQHD--- 68 
XP_020168270        1 MGq-C-GCFg-AAQKEQRaeADRLEA-QEARARAAEAAQKRQQEYE-------KSAAGRAARAQIKAMKEAK-TSSNqgE 68 
XP_002510092        1 MGlSCLACFd-GGSKRQRqeEDRLAA-AEARAKAAEAAQKRQEEFE-------KSAAGRAARAQLQGMAKQS-ANSNkgE 70 
CAN72852            1 MGf-C-DCFggGLSKQERleEERIAS-EEARAKAAEAAQKRQEQFE-------QSAQGRAARAQQAAMAKQS-ASSNkgE 69 
KRG88771            1 MGl-CFGCF--GVDKRMSkeEERLAS-EEARAKAAEAAQKRQEQFE-------NSAAGRAARAQQQAMAKQS-ANTNkgE 68 
XP_002407863       76 ANLR 79 
Q3UZP4             70 GGLR 73  house mouse
XP_002755165       70 GGLR 73 
XP_018672979       69 NNLR 72 
jgi:MICPUN_109194  72 vrdw 75 
CDS40553           69 AGLR 72 
XP_020168270       69 PVLK 72 
XP_002510092       71 PVLK 74 
CAN72852           70 PVLK 73 
KRG88771           69 PVLK 72 
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap