Conserved Protein Domain Family
Trm10euk_B

?
cd18100: Trm10euk_B 
eukaryotic tRNA m1G9 methyltransferase Trm10 homolog B
Eukaryotic tRNA m1G9 methyltransferase Trm10 homolog B (TM10B) catalyzes the N(1) methylation of guanine at Position 9 (m(1)G9) of tRNA, which might play a role in the stabilization of tRNA and in translation termination efficiency. Trm10 is a member of the SPOUT (SpoU-TrmD) methyltransferase (MTase) superfamily, a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.
Statistics
?
PSSM-Id: 349973
Aligned: 17 rows
Threshold Bit Score: 276.065
Created: 29-Aug-2016
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
 
SAM binding
Feature 1:SAM binding site [chemical binding site]
Evidence:

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
XP_002733279 115 LCICIDCGFEknmdKKEICKLSQQLGRLYGSNRqaqkPFHVYFTNLdtegtIYKECVRVNCGFEDYIIDKVenshFDIFR 194 Saccoglossus ko...
KQK81750     113 PRLCVDLGVAdrmtEKETSRLASQIRRLYGANRraekPFWLCLTEFvvgslIYEECFRMNDGFSNYLMDTTqesyLDLFP 192 blue-fronted am...
XP_002130384 434 LVVCVDLSWShsmnDKEINKLASQLGRLYGSNRkaeaPAHVYFTGFkkgtlIWNECHRKHNGFNEYKISMTdkspIEMFN 513 vase tunicate
Q08BM0       113 LRLCVDLSMTehltHKEISRLAAQIRRLYGSNKkalqPFHVFLTELqedslLYKECVGMNDGFMHYLIDVTeeswFHLFP 192 zebrafish
EKC37604     138 QRICIDLSMEntmtSKEKNKLAQQLCRLYGVNKkadtPAHVYFAGFdkngeLYQECIQKIDGFEKYQVEMTevpvLELFD 217 Pacific oyster
OCA50017      81 PRLCIDLSMTqhmtKKELSRLSAQIRRLYGSNKkaakPFWLYLTSFagnslFYDECVRMNDGFVNYLVDTTensfLDIFP 160 western clawed ...
XP_015927721 563 PKVCINLGFAtkmvEKELGQLASQLRRLYGSNRhsftPLHLYFCNLetsdkLYQICLAKNDGFSSYVVDITpeepENLFE 642 common house sp...
Q6PF06       125 PRLCIDLSMThymsKKELSRLAGQIRRLYGSNKkadrPFWICLTGFttdspLYEECVRMNDGFSSYLLDITeedcFSLFP 204 human
XP_013395743 323 QRVCVDLGLEqhmsDKEKSKLAQQLGRLYGSNRqsedPMHIYFTNLnkdgvLYQECVRKNEGFENYMVDMTekshMELFK 402 Lingula anatina
EDV28004     328 QRIVIDMGLTegmtNKEISKLCNQVGRLYGSNCiaedPWHIYFTRFgqedeLYQRCTEFHHGFQNYKIDVTtesvLELFP 407 Trichoplax adha...
Feature 1              ###                ## # #                    ## #                ## #  #  
XP_002733279 195 kdEIVYLSPDSSNVLETLdpDKVYIIGGLVDESpQKNVTLSNADvneiyTAHLPIAeymektd-gkfsyskILAINQVFD 273 Saccoglossus ko...
KQK81750     193 ldAIVYLTPDSENVLEDIdpNKVYILGGLVDESiHKKLTLQRAReqslqTARLPIReymvkavntknyhseTLAINQVFD 272 blue-fronted am...
XP_002130384 514 neNIIYLSPDAETALSNVeaGSVYVIGGLVDETvCKKLTLDAATehgicTRRLPVKefmkksg-rhknystVFAVNQVFD 592 vase tunicate
Q08BM0       193 seDVIYLTPDASEALESVeeDKIYILGGLVDETiHKKISYTKAKelgvrTARLPIDeymvkkenpknfhskILAINQVFD 272 zebrafish
EKC37604     218 tnDIIYLTPDATDMLEDLdkDKVYVIGGIVDESvIKNLSKQRADaanipTYRLPIDrymrrkd--qihfsqILAINQVFE 295 Pacific oyster
OCA50017     161 leTVVYLTPDSDNALEDVnpEKVYVLGGLVDESiQKKLTYHKARehglqTARLPIQeymvknvnvknfhseILAINQVFD 240 western clawed ...
XP_015927721 643 qkDLIYLSPDSENVLETLdkNKIYVIGGIVDGTvKKDLSLNHAKdynihTVRLPITeylvpcs--tnpgttVLTVNQVFD 720 common house sp...
Q6PF06       205 leTLVYLTPDSEHALEDVdlNKVYILGGLVDESiQKKVTFQKAReysvkTARLPIQeymvrnqngknyhseILAINQVFD 284 human
XP_013395743 403 reDLVFLTPDGSTVLTGLdrNKVYVMGGLVDESpNKNITSSAAQtagvqTARLPIDeymtkgd--qgtfskILAVNQVFD 480 Lingula anatina
EDV28004     408 peEIVVMSPDSKNVLRKIdsSKVYVLGGIVDESiRKRISLHYGMqcevaTCRLPIPeymmkae--kgtynqVLSINQVFD 485 Trichoplax adha...
Feature 1                               
XP_002733279 274 ILLTYHntgDWREALLTGVPARK 296 Saccoglossus kowalevskii
KQK81750     273 ILSTYYetrSWPAALKAGVSSGK 295 blue-fronted amazon
XP_002130384 593 ILLKYHsakDWVEAFKLGVPPRK 615 vase tunicate
Q08BM0       273 ILLTFRdtrDWTKALMAGIPPGK 295 zebrafish
EKC37604     296 ILVTYLsskNWRAALSRGVPERK 318 Pacific oyster
OCA50017     241 VLSTYCrtqSWPEALQAGVSPGK 263 western clawed frog
XP_015927721 721 ILLKYYeteNWIEALSSNVPIRK 743 common house spider
Q6PF06       285 ILSTYLethNWPEALKKGVSSGK 307 human
XP_013395743 481 ILLKFQqtgDWRQALMAGVPQRT 503 Lingula anatina
EDV28004     486 ILLHFAktgDWVESLQVGIPQRK 508 Trichoplax adhaerens

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap