Conserved Protein Domain Family
7tmA_GPR84-like

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cd15210: 7tmA_GPR84-like 
G protein-coupled receptor 84 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors
GPR84, also known as the inflammation-related G-Protein coupled receptor EX33, is a receptor for medium-chain free fatty acid (FFA) with carbon chain lengths of C9 to C14. Among these medium-chain FFAs, capric acid (C10:0), undecanoic acid (C11:0), and lauric acid (C12:0) are the most potent endogenous agonists of GPR84, whereas short-chain and long-chain saturated and unsaturated FFAs do not activate this receptor. GPR84 contains a [G/N]RY-motif instead of the highly conserved Asp-Arg-Tyr (DRY) motif found in the third transmembrane helix (TM3) of the rhodopsin-like class A receptors and important for efficient G protein-coupled signal transduction. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, which then activate the heterotrimeric G proteins. In the case of GPR84, activation of the receptor couples to a pertussis toxin sensitive G(i/o)-protein pathway. GPR84 knockout mice showed increased Th2 cytokine production including IL-4, IL-5, and IL-13 compared to wild-type mice. It has been also shown that activation of GPR84 augments lipopolysaccharide-stimulated IL-8 production in polymorphonuclear leukocytes and TNF-alpha production in macrophages, suggesting that GPR84 may function as a proinflammatory receptor.
Statistics
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PSSM-Id: 320338
Aligned: 15 rows
Threshold Bit Score: 272.602
Created: 3-Oct-2008
Updated: 25-Oct-2021
Structure
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Aligned Rows:
  next features
Feature 1:putative ligand binding pocket [chemical binding site]
Evidence:
  • Comment:based on the structures of some class A family members with bound ligands (peptides or chemicals), agonists, or antagonists
  • Comment:Small-molecule chemical ligands tend to bind deeper within the receptor core, compared to a peptide ligand neurotensin, which binds towards the extracellular surface of its receptor.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                 #  ##           ###### 
Q9NQS5        21 YVAVSWGVVVAVTGTVGNVLTLLALAIQPKLRt-rFNLLIANLTLADLLYCTLlQPFSVDTYlhlhWRTGatfCRVFGLL 99  human
Q9NDM2        36 LFAAISACVFVTIGVLGNLITLLALLKSPTIRehaTTAFVISLSISDLLFCSFsLPLTAVRFfqesWTFGttlCKIFPVI 115 fruit fly
XP_001844746  23 ITRDQSPTSLDAKREPRNLLTVIALLKYHKLRkhpTTAFVLSLSISDLFFCAVnMPLTAIRFhhqqWTLGeglCKVFPVF 102 southern house ...
EFX66166       7 YFAAACAILFVFIGIGGNSLTVAALVRSRKLRshaTTAFVLSLAGSDLLFCAFnLPLTASRYiyesWILGdtlCRLFPFF 86  common water flea
ADI49712      20 YFGATWGIMVSLVGTIGNVLTVLAYALDKKLQt-rFNLLIINLSLADILYCTFlQPFSIDSYlhlyWRSGttfCRVFGML 98  African clawed ...
EMP30242      21 YVAVSWGVVVTVVGTLGNVLTLLAFAADAKVQt-rFNLLIVNLTLADLLYCALlQPFSVDSYlhlhWLAGpsfCRVFGML 99  green seaturtle
EFX83356      57 HFAVGACVLFTLIGVPGNFITIVALLRYTKVRn-aTAMFIINLSVSDLMFCCFnLPLATSLFyhraWVHGealCTLFPLM 135 common water flea
AAI53320      25 YFGVLLGSAVTIVGTIGNILTVLAFVTDANLRt-rFNVLIVNLAFADLLYCTIlQPVSVDSYlhlhWRGGatwCRMFGLL 103 zebrafish
EFN86818      51 YFAAACCILFMLLGIPGNLITVVALFRTQKLWn-sTAIFIMNLSLSDLMFCCFnLPLATSTFwhraWLHGsllCRLFPLL 129 Harpegnathos sa...
EAA01815      34 NIATVTCIAYMVVGVPGNLLTIVALVKSKKTRn-aTAVFIMNLSFSDLLFCCFnLPLAASTFwhqaWLYGdlfCRLLPMM 112 Anopheles gambi...
Feature 1        ##  #                                              # #####                      
Q9NQS5       100 LFASNSVSILTLCLIALGRYLLIAhp-klFPQVFs-aKGIVLALVSTWVVGVASFAPLWPIyi----lvPVVCTCSFdr- 172 human
Q9NDM2       116 FYGNVAVSLLSMVGITLNRYILIAch-srYSQIYk-pKFITLQLLFVWAVSFLLLLPPILGiwgemgldEATFSCTIlk- 192 fruit fly
XP_001844746 103 FYGNVAVSVLSMVGLTLNRFTLILhp-srYPKIYt-pISLALQLFGIWAFSFGIMLLPLFEiwgrlgldEETFSCTIlk- 179 southern house ...
EFX66166      87 FYGNVAASLFSMVLITINRYILIAsp-swYDKIYr-rPLIVLMILGSWLFSFLMMTPPLLGiwgdlglnPATFSCTIlpg 164 common water flea
ADI49712      99 LFVSNSVSILNLCLIAVSRYILIAnn-klFDRIFc-rLGVSLILLGTWVVGFSSFAPLWHVfv----lvPKVCTCSFhr- 171 African clawed ...
EMP30242     100 LFVSNSVSILTLCLIAVSRYVLIAnp-alFNRVFs-rLGVGLVALGTWVLGFASFAPLWPVfv----lvPKVCTCSFhr- 172 green seaturtle
EFX83356     136 RYGLLAVSIFTVLAITLNRYIMIGhp-rlYPKLYk-rRHLILMIALTWLGCFGSLLPTLLGqwgtfgldKEIGSCSIlpd 213 common water flea
AAI53320     104 LFLSNSVSIITLCLIAMSRYLVVAhrtssCARLLlsqRGVAALLISSWVLGLASFAPLWPVyv----faPQVCTCSFhr- 178 zebrafish
EFN86818     130 RYGLVAVSLFSVLAITINRYVLIGhp-hlYSTLYk-tKYLMPMVLAIWIFSFGLLVVTWFErwgrfgldTAIGSCSIlpd 207 Harpegnathos sa...
EAA01815     113 RYGLLAVSLFTILAITINRYIMIGhq-rlYQRIYr-tKNLCLMVAFTWILGFGSLLPTWHEkwgkfgldINIHSCSIlpd 190 Anopheles gambi...
Feature 1          #  ### ### ##                                                                 
Q9NQS5       173 irGRPYTTILMGIYFVLGLSSVGIFYCLihrqvkraaqaldqyklrqasihsnhvartdeampgrfqeldsrlasggpse 252 human
Q9NDM2       193 keGRSIKKTLFVIGFLLPCLVIIVSYSCiyitvlhqkkkirnhdnfqiaa------------------------------ 242 fruit fly
XP_001844746 180 kdDSSPKKFIFLFGVLVPCIVISISYSCifytvhkqrakvkah------------------------------------- 222 southern house ...
EFX66166     165 enGKSPKKFFFAFGFLIPCLTIIVSYTCifvkvkqsrrnvmahraeehqan----------------------------- 215 common water flea
ADI49712     172 ikGRPYTTILMAFYFVIGLSCVGIFYFLihrkvksaaqaldqyklktknkakdhvaginstdigkyqemdsgvd------ 245 African clawed ...
EMP30242     173 irGRPYTTILMAFYFVVGLSCVGIFYFLihrkvkgashamdhyklkkaslkgayvagaslatpgqfveldsgvd------ 246 green seaturtle
EFX83356     214 ahRRSPKEFLFVVAFVLPCLAIVVCYARiffivrraaavshgnqqqqnhqsqqsgasaglkpsasvrsrtgiggivpgem 293 common water flea
AAI53320     179 tkGRPYATVLLFLYFFLGLGFVGLFYFLiyrkvsvaakaflkyrpsrrsskrkqaeaegttddsgisagasttqsceiss 258 zebrafish
EFN86818     208 vnGHSPKIFLFVLAFLIPCLAIIVCYARifyivrksslksrggnrivnvelteinneqrssstrnqeeelsvfctspipm 287 Harpegnathos sa...
EAA01815     191 sqNNSPKQFLFFIAFALPCLAIIVCYARifyivrstalrtkdlpgdnldensvedvssavsnqqqqpaphpgqyagssat 270 Anopheles gambi...
Feature 1                                                                                        
Q9NQS5       253 giss---------------------------------------------------------------------------- 256 human
Q9NDM2           --------------------------------------------------------------------------------     fruit fly
XP_001844746     --------------------------------------------------------------------------------     southern house ...
EFX66166         --------------------------------------------------------------------------------     common water flea
ADI49712         --------------------------------------------------------------------------------     African clawed ...
EMP30242         --------------------------------------------------------------------------------     green seaturtle
EFX83356     294 rrglmlpgsaaalthpgy-------------------------------------------------------------- 311 common water flea
AAI53320         --------------------------------------------------------------------------------     zebrafish
EFN86818     288 patylvsgleeevdedsscskqllddelqtnctttlhvnratmsnnvrldsnrsnsydtfhgsltitaedipfadepdvs 367 Harpegnathos sa...
EAA01815     271 itpekdlpappplsyinfsqhdadwhyidssteneifcstts-------------------------------------- 312 Anopheles gambi...
Feature 1                                                                                        
Q9NQS5       257 ---------------------------------------------epvsaattqtlegdssevgdqinskrakqmaeksp 291 human
Q9NDM2       243 -------------------------------------------------------------------------------a 243 fruit fly
XP_001844746     --------------------------------------------------------------------------------     southern house ...
EFX66166     216 ------------------------------------------------------------------------------vp 217 common water flea
ADI49712     246 -------------------------------------------------------tavssevisehvpsnkstsqsavts 270 African clawed ...
EMP30242     247 ------------------------------------------------------tgvsqpssiseqghtpktlvmengpa 272 green seaturtle
EFX83356     312 ------------------------------vkqsmnnppsvmeasfhltccesqqgsgsteiseettersghhlaagale 361 common water flea
AAI53320     259 -------------------------------------------------dgavaekhgkqaqegqtttqnatqnassett 289 zebrafish
EFN86818     368 vkakrflnknqsrdkpqrrsskgycnqlnrmtsrasfimesslwargvadddqlnhletfvgsrshspeqsfkrqairre 447 Harpegnathos sa...
EAA01815     313 ------stedvshravdvkpthnhhtvvdrcdcsgnrsppdqteeegylensnvksrnqpryanasgpgvrrnasnvnar 386 Anopheles gambi...
Feature 1                                                #  ## ##  #      ## ###  #  ##          
Q9NQS5       292 peasakaqpikgarrapdssSEFGKVTRMCFAVFLCFALSYIPFLLLNILDarv-qaPRVVHMLAANLTWLNGCINPVLY 370 human
Q9NDM2       244 kgssssgggsymtttctrkaREDNRLTVMMVTIFLCFLVCFLPLMLANVVDderntsYPWLHIIASVMAWASSVINPIIY 323 fruit fly
XP_001844746 223 ------sasgsgriesffrnKEDCRLTVTLLTIYLCFLICFMPLMLANVIDdd--gsHANLHVFASVLAWMSAVINPFIY 294 southern house ...
EFX66166     218 vmksvnkkpgkkstsekhqrRDDLRLTRMMLIIFCCFLLCFLPLMVVNVADdekktkVPVIHVMASILAWASSVINPFIY 297 common water flea
ADI49712     271 hstdheklerrtlpqpkesgSDFKKVTRMCFVVFLFFVVSYIPFLLLNIFDakn-kaPQMLHMIAANLTWLNSCINPILY 349 African clawed ...
EMP30242     273 paltpaqklkslpsqpkdsnKEFRKVTRMCFVVFLFFVLSYIPFLLLNIFDakn-raPTWLHMVSANLTWLNSCINPVLY 351 green seaturtle
EFX83356     362 plvttttatvvipkrtgsilRWNRKLLQMILVIFVSFIVCYMPITLVKSLSkev-dlGGAINIVGYVLIYLTTCINPIIY 440 common water flea
AAI53320     290 skaspvviqntpaaansgedNEFKRVTRMCFTVFLCFVGCFAPFLLLNVADkkn-raPQVIHMICANLTWLNSCINPLLY 368 zebrafish
EFN86818     448 skfrtvvsrirngeavprmsDKDRKVLQMILVIFLSFLVCYLPITITKLFHdm--vdWRGLNITGYILIYLTTCINPIIY 525 Harpegnathos sa...
EAA01815     387 krkkhlntsgasimsagkmsAKDKKLLQMILVIFLAFLVCYLPITVVKLFRp----sVQVLNVVSYLLIYLTTCINPIIY 462 Anopheles gambi...
Feature 1                   
Q9NQS5       371 AAMNrqFRQAY 381 human
Q9NDM2       324 AASNrnYRVAY 334 fruit fly
XP_001844746 295 AIGSqnYRHAY 305 southern house mosquito
EFX66166     298 AFSNrqYRSAY 308 common water flea
ADI49712     350 AAMNrqFRDAY 360 African clawed frog
EMP30242     352 AAMNrqFREAY 362 green seaturtle
EFX83356     441 VVMSseYRQAY 451 common water flea
AAI53320     369 AAMNrqFNQAY 379 zebrafish
EFN86818     526 VVMSseYRSAY 536 Harpegnathos saltator
EAA01815     463 VVMSreYRQAY 473 Anopheles gambiae str. PEST

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