Conserved Protein Domain Family
Cas5f

?
COG5933: Cas5f 
CRISPR-Cas system type I-F effector complex subunit Cas5f/Csy2, RAMP superfamily [Defense mechanisms]
CRISPR-Cas system type I-F effector complex subunit Cas5f/Csy2, RAMP superfamily is part of the Pathway/BioSystem: CRISPR-Cas system
Statistics
?
PSSM-Id: 444631
Aligned: 38 rows
Threshold Bit Score: 391.563
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WP_108603333   1 M-----SQYILIERIKVQNANAASG-FTWGFPAITHFLGFSHNLNRNLKSNgefSYLALEGCVVVAHEQHVHAYKDFG-- 72 
WP_010906578   1 Mfq--tDFYILFDHIKVQSANAISGpLSYGFPALTGLTGAMHALNRKLTHH----PVQFGGVMVACHDYELQTYQNSAfs 74 
WP_012729575   1 M-----KSLLLLRQINVENANAISG-LTYGFPGISHFLGFTHALSRQLMQA---HNLRLGGCAVVCHHHQLQAYQPGGrg 71 
WP_013163748   1 Mm----DTMLILRNIKVENANAIAG-VTWGFPAISNFLGFVHAISRKLPPH---FSLQPNGCGIVCHDFQVNAHQPKGwg 72 
WP_003662185   1 MndkvrVGCVYFHKMVIYDANTISSpLTYGLPALTGFTGAFHALSRTLMADerfADLALGGVLLACYECTPKTYRAGRyh 80 
WP_005540023   1 Mn---tDFYLLFKHIKIQSANAISGpLSYGFPAVSGFVGAIHALSRKLNEK-----AMLDGVTIACHNYDLQAYQSTPfs 72 
WP_013505551   1 M-----KSLLILKRLRIENANAISG-MTWGFPAITNFLGLTHALSRFTQER---QGVSLGGCGVICHWHQVKAYQPGGrg 71 
WP_013747106   1 Mse--aNFYLLLKNIEIHQANAISGpLTYGFPAISGFIGAIHRLNRTLQSDy--PDIALDGVLIACNHYTLQTYRHHQya 76 
WP_044618895   1 M-----KSLLILRRVSVENANAISG-ITYGFPAMTHFLGFTHALSRMMQSQf--EHLCLKRCCVIAHSHQVKSQQPKAwg 72 
WP_008247106   1 Msq--iSHYLLLDRIKVEKANAISSpLTYGFPAISGIMGAVHALNRKIVDAg--FSVDLSGVLIACHAIHVHSYRPHRya 76 
WP_108603333  73 VTRFTQYKTShqrevkFEKDGTl----kGASIIEEAKMNMTVSLLIPVSGYLg------------gAQDELIQFIKNSCQ 136
WP_010906578  75 DRTFKQTRNP------IKRNGE------TASIIEEGKIHLDLSLVVEVHVQDdrvfeal-tdktsqASQDFLQTCKNLLW 141
WP_012729575  72 DFVFALTRNP------LTKEAN------TASFNEEGRMHLQISLMIECEFDAddlpfg--sgqpeqDVTMLTDWFSQKVP 137
WP_013163748  73 DYVFALTRNP------LTKQGE------TASFVEEGRMHMDVSMIIPCDGEVpi----------nlDPEEVTEQIEQLLL 130
WP_003662185  81 DHTFNQTRNP------LKKDGK------TAPIVEEGKCNLVMSFAVEVLASDlls---------ekRSQELTQFLSQAIF 139
WP_005540023  73 DRTFIQTRNP------LKKNGE------TAPIIEEGKVHLDISLVIELHISDkmlshqvennlncdEAKIFLSECKNLLL 140
WP_013505551  72 EYVFGLTRNP------LVQDKKnkdkwtTPPFNEEGKMHLEVSLLIECDFRPkklnfn--tgnpdeDAELFSRQIQEKLL 143
WP_013747106  77 DYTFKQSRNP------IKKDGS------SSSFIAEGKIDLNVSLVIEVIASGelqdd----laddeKANKFVENIELLIK 140
WP_044618895  73 DQVFALTRNP------LTKEGK------TAPFNEEGKMHLEVSLIIEIEGFLdr-----------dDDVDVPEFIAEKLP 129
WP_008247106  77 DYSFNQSRNP------IKKDGS------TAAIIEEGKADLTFSLVIEVSASRsvar------diddNQEKLEKQCKEWVL 138
WP_108603333 137 IQRLAGGTILSVANV---DIVDL-----AKEDHLRSVRRKLLPGFVLQDRANYLEEHFLKLKE----------------- 191
WP_010906578 142 QQRIAGGSVLEIGNV---QLFNL--------EEDQDIPLALMPAFVLMDAKQELANITEELKTglrigqldee------- 203
WP_012729575 138 CLRLAGGTITSVGHV---SWLELkqdseEQHKQVRRLMMRLLPGFALIGRHELLLAHHQKCLA----------------- 197
WP_013163748 131 EHRLAGGTILEVGAI---ELVRLpeeeaSLAKFERRQLRKLLPGFALVQRADLLAQHTEKCFQ----------------- 190
WP_003662185 140 RQRIAGGSVMNIAKThpvRYF--------GFESMHQIVPLLMPAFVLMDASSEFSELIDKAQS----------------- 194
WP_005540023 141 KQRIAGGSVLSIEDV---QLHYL--------EDEWKIKRQLLPGFVLMNAQAELIKITEELQQglkqgd----------- 198
WP_013505551 144 TLRLAGGIIQSIQEV---RFETLpetteDQQKWTRKKLLKLLPGFALVDRSELLTEHFQQLKE----------------- 203
WP_013747106 141 QQRIAGGYVLNSPTG---QLFSL--------AEGEAILKKLQPAFILMDAQLHLAAITKELQTgfkhqihnnqvqlvqde 209
WP_044618895 130 LLRLAGGSVISWRGI---DIQdd----cQDEKSARRLLFSLLPGYTLIDRSELLWSHHQALME----------------- 185
WP_008247106 139 QQRMVGGSVHAVKQV---RLL--------DGSEEKEIIKHLLPGFVLMQATQELLEITRELQQ----------------- 190
WP_108603333 192 ----------QNPKVGLLDAWFDFIALKQVARPECDlldkhlakqadksdsfytindiwlehksqpydqknipcelvnyf 261
WP_010906578 204 -gnvqksclpSCPEATALDALLEMATVHHIPEHANA-------------------------------------------- 238
WP_012729575 198 ----------ESSDAQLIDSWLDFVALRYRSERADA-------------------------------------------- 223
WP_013163748 191 ----------QNPEMDAMDAWLDFSALKFMAVVEGDnenq---------------------------------------- 220
WP_003662185 195 ----------TDPKATPLDVLLDVCTLHHLPKLDLD-------------------------------------------- 220
WP_005540023 199 -----fvvleANPDATAFDALIETAILHHIPNHPHA-------------------------------------------- 229
WP_013505551 204 ----------QHPEAELLDAWLDFAALKYQAQPDPDsee----------------------------------------- 232
WP_013747106 210 nqqpvlshypANPEATELDALLEIACLHHIPTQQQ--------------------------------------------- 244
WP_044618895 186 ----------ENPQASMLDAFLDFCTLQYRPVVDSEtneq---------------------------------------- 215
WP_008247106 191 ----------AKPEATALDALIEVSTLHHEPVETKV-------------------------------------------- 216
WP_108603333 262 adqqenidpkvltqwqsyllpneKTPANWEYV-KKpqTGYLVPIMTGYKAITKVYPAGEIDGARDAETDLCFVESVHSVG 340
WP_010906578 239 ------------------------TASAWQTYsVKkgRGWLVPLPVGYQAISPLFAPGQLQHCRTQQYPSQYVETLYSLG 294
WP_012729575 224 -----------------------SGHANWVMQ-PKpeSGYLVPMVVGYQAISPLYGTGAVANSRDSDTPFCFVESAYSIG 279
WP_013163748 221 --------------------ddhSGKVEWQYI-PKpgKGWLVPITVGYRGISDLFEPGEVLKARDSSVPFRFVESAYSIG 279
WP_003662185 221 ------------------------GNTKWHTKsIKtgHGWIVPMPMGYQAISEQFEAGKMDNVRNPEYPSQYVEVVYGLG 276
WP_005540023 230 ------------------------KTNEWQTYsIKqgRGWLVPIPVGYQAISPLFEAGQLQHCRTQDYPSQYVETLYSLG 285
WP_013505551 233 --------------------lteKTPAIWELQ-PKpaEGWLVPIMTGYQSISPLYEPGEVAHTRDPSVPFRFVESAYGIG 291
WP_013747106 245 ------------------------NSVKWTIKsAKqdRGWLVPIPIGYQGIYPPFNAGEMLNSRAPQYPHQYVETIYSLG 300
WP_044618895 216 --------------------pteSTKAKWEYK-PKpaAGYLVPIMTGYKGISPLYPAGEVANARDPNTPFQFVESVYGIG 274
WP_008247106 217 ------------------------NKNGWQTRsVKtgKGWLVPIPVGFQSIAPQFAPGELANCRTNQYPSQYVESIYSLG 272
WP_108603333 341 EWQSVHRLKS-HdhwQASVWNYA-PYEQDWYLCQQERGTDKQIAQTEST 387
WP_010906578 295 KWVFPLSLPEnL---SQCFWRYTa-PQNNLYLISQGE------------ 327
WP_012729575 280 QWLSPHRVQS-L---EQIIWRYHy--SDGLYLCHNGYTSVVNEEFENSE 322
WP_013163748 280 EWLSPHRLGK-I---QQLVWRYDvDPESGWYLCKNDYQPEKTAN----- 319
WP_003662185 277 KWVYPHHLKDnI---ETAFWRQHyD-ETGLYLLTQNELS---------- 311
WP_005540023 286 KWVSPLNLPEdL---SRCFWRYTe-PKNNLYLISQGDQ----------- 319
WP_013505551 292 QWLSPHRINK-L---EYLIWRYYq--KDDCYLGINHYQPEAPI------ 328
WP_013747106 301 QWVFPYRLQQqF---EHCFWRYSn-PQDNLYLYTQGESK---------- 335
WP_044618895 275 EWISLNKFIT-L---DPLFWQYQ--PRDDWYLCTQKIISNEA------- 310
WP_008247106 273 KWVFPYRLPKqF---SNSFWRYKq--SNNLFLFSQSIQNQQGE------ 310
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap