Conserved Protein Domain Family
SRR1

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pfam07985: SRR1 
SRR1 domain
SRR1 proteins are signalling proteins involved in regulating the circadian clock in Arabidopsis. This presumed domain has a Rossmann-like fold and structural models suggest it may have a methyltransferase function.
Statistics
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PSSM-Id: 462330
Aligned: 132 rows
Threshold Bit Score: 66.984
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
GAC93259     109 FASELARVvkrvwpveqstlqckadaeaqtsqdssprpraeepqdalhppsssqaSTAPPLPRQIVCLGLGSP-----TT 183
XP_003059582  69 LLRALEPStsdaddatnaaaad--------------------aadatddandaarRRAFPRPDAVVVLGLGSP-----SA 123
Q7RKB1        89 FKKKFKEI-----------------------------------------------KKENIIIQSAICLGLGSLtdinlNN 121 Plasmodium yoel...
XP_002257910  81 FHQQFMEVv----------------------------------------------DKANVNIKYAICLGLGSLadpnwNN 114
1_pfamImport   1 VVENFELStgkte--------------------------------------evktEEEPASRPMLVGYGLGSF-----CT 37 
4_pfamImport   1 IVKQFHLTeact----------------------------------------sldKDAEDERLMVVGYGLGSF-----CA 35 
XP_001610759  59 LLKRLRIY------------------------------------------------QGSSSFHRMVALGIGSPtalslPL 90 
XP_005849081  63 QLERLPPH------------------------------------------------CAGAKLQSMVVYGLGSL-----EQ 89 
XP_010312458  40 MVLGLKKIsphl----------------------------------------sdlPVGPNSKAKVVIYGLGSI-----EF 74 
8_pfamImport   1 IKKHFFRL------------------------------------------------LGSHSDVQVVIYGLGSI-----EY 27 
GAC93259     184 SRSA--QIQLALLVVIRSWLLRHSsrssssalgsktiegsMECLAFDPVFSAADTALLK--------------------- 240
XP_003059582 124 SLVS--RYQLALALALAERFDVPR----------------ASVALYDPAFSPVDVALLTr-------------------- 165
Q7RKB1       122 KNAC--MYQLAFILLVSKNYNIK------------------HIYIYDPKISNTDLNVYK--------------------- 160 Plasmodium yoel...
XP_002257910 115 RKAC--LYQLGFVLLLRRIYKVQ------------------KVYIYDPKSGDVDRNICG--------------------- 153
1_pfamImport  38 SSNA--VHQLGFLVALKEALDEGKaveqg------cdkiqHCAEIFDPAMNKSDAAITK--------------------- 88 
4_pfamImport  36 SSNA--VHQLGFLVALKQELDKGWrltadtkeaakpdgiqPTVELFDPAMNKSDAVIAE--------------------- 92 
XP_001610759  91 TQAC--CYQLAVCLVVRDIFDVE------------------NVDVFDPIMDANDVEACRsllfeyrssipdlgeicrdvy 150
XP_005849081  90 PGAVhiRYQLAAARLLAAALPLAA-----------------AAQAFDPVFTALDRATLA--------------------- 131
XP_010312458  75 NYNS--QVQLALFLLLKDRVDWMG-----------------DIEIYDPVMSTVDMKVFG--------------------- 114
8_pfamImport  28 SFSS--QFQLAVALLLKRDFFNWI----------------GNIEIYDPCLSPADIIVFE--------------------- 68 
GAC93259     241 RYDVRTLssslhtevEQKEHNQGnraesi-------epfytAITEpTLLYM--PHCDRGLYEEVLSLNysssattt---- 307
XP_003059582 166 VLGCRAMtreasdaiAGDAATPRt--------------------TpTMFFM--PHCEAWLYENVLRAHwgr--------- 214
Q7RKB1       161 ILNVQVLssytsiskQLAENEKEitv------------cnlKENEnVLLFM--PHCDISLYGEVLYNIfiyeklsyp--- 223 Plasmodium yoel...
XP_002257910 154 RFDIEVLspceeqhnVDEELQRNrcpqgeeddstshiiektsahErTLVFM--PHCDVSLYSQVMHSIymneklnya--- 228
1_pfamImport  89 HFKLKVL--------QENEHGRR------------------RVERnTVFFM--PHCGKALYQNVLACNwgp--------- 131
4_pfamImport  93 QLGMTVI--------QENEHGRR------------------KVVCnTVFFM--PHCAKVLYENVLACNwgl--------- 135
XP_001610759 151 ELSDEES--------VADDLPHL------------------------ILWM--PHCEASLYKAVLLAIdagedplcaaet 196
XP_005849081 132 HCSMEVL--------AQDERGRR------------------LARSpTLFFM--PHCEGLLTDALLAANlaa--------- 174
XP_010312458 115 IFGLKAL--------HNDENGRR------------------KAQGpTMFYM--PTPSYFLLGNILEANwss--------- 157
8_pfamImport  69 KLDLKVL--------TIDENCKR------------------RVQRpTMFYMpyPHC--YLIGNLLGVNwss--------- 111
GAC93259     308 -------qtpkpngpSP------IVLLCNTLSNYQNtt---------------------------------sdQDLQNHA 341
XP_003059582 215 ------------agrEAkpplraHSFCGNTFETYVErwatrg-------------------------gdpkrpRRVLAAA 257
Q7RKB1       224 -------nmnfllipEK------TIYIGNSFDYYKDhiyqhkpfgipsfaiellqkneqsenikwdithlnkvKKNFKYS 290 Plasmodium yoel...
XP_002257910 229 -------kahffltlEK------TIFLGNSFEYYREhiymyrpfgipayaihml-rnrgtvvetpgersinrlVEFYKID 294
1_pfamImport 132 -------------emAK------LVIIGNSFSAYGD-------------------------------------------- 148
4_pfamImport 136 -------------avKK------LVIIGNSFSAYGD-------------------------------------------- 152
XP_001610759 197 laghsrhsprsrynlSN------VVLVGNSLKQYVGdnrlp---------------------------ehlveRVVEVAL 243
XP_005849081 175 ------------gtlHN------VVVLGNRFSGYQLawappcrg---------------------rrqageggGGAAPER 215
XP_010312458 158 ------------sslEQ------IFLLTNSLEAMEEvlpsyd--------------------------qftvaTRIRLSI 193
8_pfamImport 112 ------------sclSQ------IYLLTNSFRSTLS------------------------------------------DM 131
GAC93259     342 PTLHr-LTPQFNVEElpnweggrkglplvrqlqvgqkesktekedavgeegaeNVVGEFARlwdrnaLRDLAFHW 415
XP_003059582 258 GLIG----DVERGGIa-------------------------------------VEVDPTGSfdgrgaFNDTSVMV 291
Q7RKB1       291 HFIFy-ILNFLNEIKf------------------------------------pICSEQVHA------FNDLSIIT 322 Plasmodium yoelii yo...
XP_002257910 295 HFLFy-VHKYARERKf------------------------------------pVFADHASA------FNDMAIIT 326
1_pfamImport 149 --------RVLAAKErqelllvcalpy---------------leektlscgviKTHEDFARye--aaFNDLSVHR 198
4_pfamImport 153 --------RVLAAEErrehllekvvpy---------------leevplpcgvaKQHENFACye--aaFNDLSVHR 202
XP_001610759 244 PSFAp-FPq---------------------------------------------------------aFGDTYITR 260
XP_005849081 216 PSTMlrLCGCGAARE---------------------------------------LAVGECGfpvasaFNDLGLHW 251
XP_010312458 194 THLFr-KEIPIPESS--------------------------------------DCQMYPSL------FLGFGWHF 223
8_pfamImport 132 PRIS----QLLETVLrleril---------------------------hftaeIDIQTSDDkmyadvFSGFSWHF 175
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