1LPJ,6AT8


Conserved Protein Domain Family
CRBP4

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cd19465: CRBP4 
cellular retinol-binding protein 4
Cellular retinol-binding proteins (CRBPs) participate in the cellular uptake of vitamin A in the form of free retinol. Retinol achieves a higher chemical stability when bound to CRBPs, and its interaction with retinol-binding proteins allows the solubilization in the aqueous medium of the hydrophobic retinol molecule. There are four human CRBP types (CRBP1, -2, -3, -4) which differ in their tissue-specific expression pattern, as well as in their different ligand affinities. This group includes human CRBP4 (also known as retinoid-binding protein 7, CRABP4, CRBP4, CRBPIV) which is expressed primarily in kidney, heart, and transverse colon, and mouse CRBP4 which is highly expressed in white adipose tissue and mammary gland. Human CRBP4 binds retinol with an affinity lower than those for CRBP1, -2, -3. CRBPs belong to the intracellular fatty acid-binding protein (FABP) family, members of which are small proteins that bind hydrophobic ligands in a non-covalent, reversible manner, and, besides CRBPS, include the cellular retinoic acid-binding proteins (CRABPs) and the fatty acid-binding proteins (FABPs).
Statistics
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PSSM-Id: 381240
Aligned: 5 rows
Threshold Bit Score: 251.456
Created: 13-May-2008
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
retinol bindingligand binding
Conserved site includes 31 residues -Click on image for an interactive view with Cn3D
Feature 1:retinol binding site [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1      #     #     #  ##  # #   #  ##  # # # #      # # # # #### #              #     
1LPJ_A      3 DLSGTWTLLSSDNFEGYMLALGIDFATRKIAKLLKPQKVIEQNGDSFTIHTNSSLRNYFVKFKVGEEFDEDNRGLDNRKC 82  human
AAI62798    4 NYSGTWDIVDNHNFEGYMVALGIDFATRKIAGMLKPQKIFEQDGDSFTIKTLTTFRNYSSSFKIGEEFEEITKGLDNRKC 83  zebrafish
6AT8_A      3 DLSGTWTLLSSDNFEGYMLALGIDFATRKIAKLLKPQKVIEQNGDSFTIHTNSSLRNYFVKFKVGEEFDEDNRGLDNRKC 82  human
Q96R05      4 DLSGTWTLLSSDNFEGYMLALGIDFATRKIAKLLKPQKVIEQNGDSFTIHTNSSLRNYFVKFKVGEEFDEDNRGLDNRKC 83  Homo sapiens
Q9EPC5      4 DLSGTWNLLSSDNFEGYMLALGIDFATRKIAKLLKPQKVIEQNGDSFTIQTCSSLRNYLVKFKVGEEFEEDNKGLDNRKC 83  house mouse
Feature 1               #          # # #        # #          #   
1LPJ_A     83 KSLVIWDNDRLTCIQKGEKKNRGWTHWIEGDKLHLEMFCegqVCKQTFQRA 133 human
AAI62798   84 QTTVNWDNDRLVCIQKGEKKNRGWTHWMEGDTLYLELTCedqICKQTYKRS 134 zebrafish
6AT8_A     83 KSLVIWDNDRLTCIQKGEKKNRGWTHWIEGDKLHLEMFCegqVCKQTFQRA 133 human
Q96R05     84 KSLVIWDNDRLTCIQKGEKKNRGWTHWIEGDKLHLEMFCegqVCKQTFQRA 134 Homo sapiens
Q9EPC5     84 TSLVTWENDKLTCVQRGEKKNRGWSHWIEGDQLHLEMFCegqVCKQTFQRA 134 house mouse

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