Conserved Protein Domain Family
serpin42Dd-like_insects

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cd19954: serpin42Dd-like_insects 
insect serpins similar to Drosophila melanogaster Serpin 42Dd
Serpins in insects function within development, wound healing and immunity. Drosophila melanogaster Serpin 42Dd, also called serpin 1 (Spn1), regulates Toll-mediated immune responses, functioning as a repressor of Toll activation upon fungal infection. Insect serpins from house flies, fruit flies, and stable flies are included in this subfamily. SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.
Statistics
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PSSM-Id: 381070
Aligned: 60 rows
Threshold Bit Score: 334.56
Created: 29-Nov-2018
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
reactive center
Feature 1:reactive center loop (RCL)
Evidence:
  • Comment:depending on the conformational state, the RC loop is surface accessible in the active form or buried and inserted as the central beta strand in the inactive form.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
Q7YTY6        12 SVACQTSKEIYQLlskshtnQNLVVSPVSIETILSMVFMGAEGSTAKELQSALGLPSed----kEAVAARYGALLNDlqg 87  fruit fly
XP_017841299  10 ALSSLTVEALKQSn-----tANIFISPLLLEQGLMQLYMGAADETAAELRKVLQLDAtee-atkWQRSKNFDALPNEs-- 81  Drosophila busckii
XP_017840773  27 LSSALISPVLRKAk------GNTIFSPLLLSEGLMQLYMGAEGNTAVEIANLLQIKCtl----kAAAIEDYYKWHRTlia 96  Drosophila busckii
XP_017124284  20 SPKKFTTLELASKiilelsdTNIIISPTAIDVALAQIYLGAAGETEAELKDVLGYPGst---kaEVLAALQRRSPEI--- 93  Drosophila elegans
XP_016927489  20 FCRKFTTLQLVSKvvlehsdINIVVCPAAIEMALAQIYLGAGGETEAELKDVLSYPGks----kYQVMEAYRRAKNPq-- 93  Drosophila suzukii
XP_002135565  27 IVSNPYMSFITHLirf-qsqDNIIVSPASFHDGLIHLLMGTRGSSAAEMMGTLQLNE-------QKLNEYLKKNISSkyi 98  Drosophila pseu...
XP_017097408  21 ISYITVVSRIFYYhs----nVNMLVCPAGVEDILMQLYLGSSGASNRELKTALGARGan----lTTFMESYRISRSQiar 92  Drosophila bipe...
XP_017840323  22 ALVETVTTSLIQGvlgnsnkSNIVFSPLLLQDGLKQLYIGAEGNTSAELENLLQYNGg------YSLLSSYQGVQLPenv 95  Drosophila busckii
XP_017844974  22 VILETVSTSLIQGvlrnskkSNTLFSPVLLQDGLTQLYFGAEGNTAAELKSLLQLPGsskseaiDLYAHTNRELPQNve- 100 Drosophila busckii
XP_015031756  22 SFAENVTTTLIGNvlqqskdDNVIVSPFLLIDGLMQLYLGSEGKASEEIAKFLQLIGlr----kSEAVKKYKEWHTLnsk 97  Drosophila virilis
Feature 1                                                                                        
Q7YTY6        88 qeegpilKLANRIYVNDQYslNQNYNLAVRep-fkSEAESISLtngpVAAERINQWVLDQTSGKikgmidp-gsmtsdVK 165 fruit fly
XP_017841299  82 ------fYKANRLYVANEVniLNNYKEITN-----ETVENVNFsy-aDTTTIINKWASTATKAKvsklln---etkadTK 146 Drosophila busckii
XP_017840773  97 pa-nvnlKMGNRIYLASNVpiMEDYEHQVAev-fnATIQHVNFadsdKTVGIINRWANALTQGKitklld---ktteqTK 171 Drosophila busckii
XP_017124284  94 -------IISSRMYVASGIpiLPNYQQMSRky-lhVEAGNVDLs--fQGAHTINSWVSGKTKGRvvdlids-sllddaTK 162 Drosophila elegans
XP_016927489  94 ------lKIISRLFLSSGFsiLPAYQKMSKsy-fnIDAESTDLs--dQGVNKVNQWITSKTKGEvvdlvdp-fmmddtAK 163 Drosophila suzukii
XP_002135565  99 y--nstlKMFNQLYVDRRMwlLDRYKQDINry-fnTKFEHMNFgsidNTVDTINGWIDKKTGEKvkdmlg---wvdpeSQ 172 Drosophila pseu...
XP_017097408  93 d--npqyHFASRLITAKSVklLPHFQKLSQqylnmTTDNTLSA----QNAASINQWISSETNGKiqqlldplallsdsSK 166 Drosophila bipe...
XP_017840323  96 -----elNIASRLFVAKNVtvLKDYQENIKrl-fnSTVEFVDFkdsaKASTIINSWVANQTRDKipklie---kteasDV 166 Drosophila busckii
XP_017844974 101 ------iNMANRLFVAEKAqiLEEYQEQIKsl-fdNTVGRVNFgnsaETVDIINTWFAEHTRQKitnmid---ktsddTI 170 Drosophila busckii
XP_015031756  98 pk-gvtlDIASRIYAARDIniLTTFKKTTAdi-fnSEIENVDFanasETASIINKWIAERTNNTitelie---ttdpfTK 172 Drosophila virilis
Feature 1                                                                                        
Q7YTY6       166 ALLVNAIYFKGQWESKFdpakTRASTFQVta------nKSVPVQMMAQMGtfrANYFRDlDAQVIELPYLNSnLSMTIFL 239 fruit fly
XP_017841299 147 LLLLSAIYFKGLWALPFkkndTYAEHFFPinei--gdyYAITTPMMSISAqfaMRKIPKmNARSLEIPYANSnASMLIIL 224 Drosophila busckii
XP_017840773 172 LMLLGAIYFKAKWQQQFnklhTKLRAFSIarpn--gfiRTKQVETMQISAnfaYRRLLDvEATAIVMPFAAN-LSMVILL 248 Drosophila busckii
XP_017124284 163 VILVNVVIFQARWKYPIk--kVSTGNFYLpd-----erRSVAVKMLDHVGtfyYNFQDElDAHVAVIPFANSsLSMALIV 235 Drosophila elegans
XP_016927489 164 VILVNAASYEAFLKFNSae-rNFYLPNEK---------RSVRVKMMDLLGnfkYNFQSKlDSHIVAFPYGNSnLSMVMIV 233 Drosophila suzukii
XP_002135565 173 MVLVTALDFYGEWEKPFdpthTTKEIFETqqrnggddaPPSLVDMMHIKDkfsHGYIEKlCAYVIFLPYKKSnLSMVVLL 252 Drosophila pseu...
XP_017097408 167 LLFVNTNTFEANWIGIKr---TIQQNFFMpl-----teQHVPTTMLMLEGkysYIYQKKlEAYVVIIPLSNAtMSMALIV 238 Drosophila bipe...
XP_017840323 167 MMLLSAIYFKGLWAKPFdsklTEKREFYSldde--gknKTIKVDTMYKRDlyrSHEIQElDARTIEIPYANTtVSMVILL 244 Drosophila busckii
XP_017844974 171 AMLLSAIYFNGRWKHPFdkssTKKAKFYSlnde--geyKSIFVDTMLINAdfrSNPIQElDAEIIDIPYANSnVSMVILL 248 Drosophila busckii
XP_015031756 173 ILLLSAIYFKGTWQTQFeklnTKKKVFFTprgd--gkmRKAKVYTMTQVNnfkYKFVKKlEAHALELPYASSnFSMLILL 250 Drosophila virilis
Feature 1                                                                                        
Q7YTY6       240 PREvEGLSALEEKiv-gFARPLVAk-------EVYLKLPKFKIEFRDELKETLEKLGIRELFTDKSDLSGLFadksgGKV 311 fruit fly
XP_017841299 225 PNEmLGIIEIIEQlhtlKMHEVLPngp---tkLVKLYLPRFALDVQTELRPVLKQLGVKQLFTNAQLNKMTDfk-gnLFL 300 Drosophila busckii
XP_017840773 249 PESiDGVDRLLENlskvDIGSVTEef----etFITLTLPKFKFNVAIDFIKILKSLGVNDLFDMAELSAMSElt--gLNV 322 Drosophila busckii
XP_017124284 236 PKTfRGIRKVEDNlkslNLDALSLk-------ELQISLPKFKIKYDQDLAQPLIDLGVKSIFNNANLSDLTKsk-dkLKI 307 Drosophila elegans
XP_016927489 234 PRTfRGIGNLEDNlehlDLQQLKLk-------RVNISLPKFKIKYDQDMAQPLVDVGVKSIFNHPNLTHLTKsk-etLKI 305 Drosophila suzukii
XP_002135565 253 PRDsNGLYYITRNiheiDLQELVPtep---paEIELSFPRFRIEYRSDVSNIIKSMGIRKIFSSSANFSGLTrq-egLRL 328 Drosophila pseu...
XP_017097408 239 PKTfRGIAKVEKNlkylDLDASHLk-------NVRIKVPLFRIHYSQDMTQALIDVGVNHIFTHTDLDKLTKpr-qrLKV 310 Drosophila bipe...
XP_017840323 245 PNQiDGIDLLVKNleslHVDELLRkdv--vpsKIALQLPKFKFDLSIELKPMLQELGVKELFKAANLTKITAa---pVSV 319 Drosophila busckii
XP_017844974 249 PNQkDGIDKLVSNlhkfHAHQLTPhgsrhneyKTLLQLPKFKFEFKMELIPVLKELGVIDLFSKAANLEKITnnnppIKV 328 Drosophila busckii
XP_015031756 251 PNTvNGIGKIEQNlynlDFEEIIPrn----frTMELALPKFKFDYKLKFDDVVKSLGIREIFQNGNFTYMSDqp--nLYV 324 Drosophila virilis
Feature 1                      ################             #####                    
Q7YTY6       312 SQVSHKAFLEVNEEGAEAAGATSVAVTNRAgfs-------tflMADHPFAFVIRDANTIYFQGRVVSP 372 fruit fly
XP_017841299 301 SSVFQRALIEVEEAGAATIAAKTAAASEETvnetds--gptafYVNRPFVFFIKDNSNILFAGRVNIP 366 Drosophila busckii
XP_017840773 323 SKFLQKAFIEVSEQGAKAAAVEAIQFARGKsltg------pevNIDHPFVFLIKDEQRVYLAGVVKDP 384 Drosophila busckii
XP_017124284 308 DSIQHSAVLEVDEKGSKWAAAADDEILAGRsrsa-----gllvTCNRPFLFAVVEGKKIFIFGRLSRP 370 Drosophila elegans
XP_016927489 306 DSIAHSASIEVNERRGRSSASEDSELEILRsrrrrrsravfkvTCNRPFLFAVVQGTKILFFGRFSRP 373 Drosophila suzukii
XP_002135565 329 NQFIHKIHILVDEGGHNASAASASVQLKKKlvkrsv--aaqsfTVNHPFFFLIKDKKRIYVAGIVNRI 394 Drosophila pseudoobscura ps...
XP_017097408 311 DRILQSNFIEVNNQGVSAGSASDDFLMDRTspkt-----vkmlTVNRPFLFAIVKDKKIYFFGRVIRP 373 Drosophila bipectinata
XP_017840323 320 GSVFQKAVIEVDEKGATAAAAQVITATAVSvdta------kdfHVNRPFVFVITDFDKVYFAGRVGNP 381 Drosophila busckii
XP_017844974 329 EKVIQKAMIEVDEIGSTAAAAQVLEIVFLSgtln-----prrfIVDRPFVFLIRDFERVYFAGRVGNP 391 Drosophila busckii
XP_015031756 325 SEILQKSVIEVEESGTTAAVVQVLNINHKSavs--------rfEVNRPFVFLIKDNDNVYFAGRMSSF 384 Drosophila virilis

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