Conserved Protein Domain Family
7tmA_CXCR5

?
cd15181: 7tmA_CXCR5 
CXC chemokine receptor type 5, member of the class A family of seven-transmembrane G protein-coupled receptors
CXCR5 is a B-cell selective receptor that binds specifically to the homeostatic chemokine CXCL13 and regulates adaptive immunity. The receptor is found on all peripheral blood and tonsillar B cells and is involved in lymphocyte migration (homing) to specific tissues and development of normal lymphoid tissue. Chemokines are principal regulators for leukocyte trafficking, recruitment, and activation. Chemokine family membership is defined on the basis of sequence homology and on the presence of variations on a conserved cysteine motif, which allows the family to further divide into four subfamilies (CC, CXC, XC, and CX3C). Chemokines interact with seven-transmembrane receptors which are typically coupled to G protein for signaling. Currently, there are ten known receptors for CC chemokines, seven for CXC chemokines, and single receptors for the XC and CX3C chemokines.
Statistics
?
PSSM-Id: 341336
Aligned: 6 rows
Threshold Bit Score: 398.737
Created: 9-Dec-2008
Updated: 17-Oct-2022
Structure
?
Aligned Rows:
  next features
Feature 1:putative chemokine binding site [polypeptide binding site]
Evidence:
  • Comment:based on structures of chemokine receptors with bound ligands (chemokines, peptides, or chemical antagonists/agonists)
  • Comment:Small-molecule chemical ligands tend to bind deeper within the receptor core, compared to a peptide ligand neurotensin, which binds towards the extracellular surface of its receptor.

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1              #                                                #  #               #  ## 
P32302        52 VFVPVAYSLIFLLGVIGNVLVLVILERHRQtrssTETFLFHLAVADLLLVFILPFAVAEGsvGWVLGtflCKTVIALHKV 131 human
CAG09055       3 TYEALFYSCLFLLGVVGNGLMVTVLLSRWRllrvSEIYLLHLAVSDLLLLATFPFSILESitGWLFGdfsCKLTGLARQL 82  spotted green p...
NP_001026083  75 VFIPLAYLLMFVLGTVQNALVLVILERFKRsrttTENFLFHLTLANLALLLTFPFSVVESlaGWVFGtflCKILSAVHKI 154 chicken
BAM65823      59 VFIPLVYTLVFILGFLGNSLVLLILIKFRRsrstTENFLLHLALADLLLLVTFPFAITESvaGWVFGrflCKLVGVISRV 138 African clawed ...
ACZ06879      59 VFQPLVYGVVFLLGLTGNGLLLTVLLKRRSnlriTEIYLLHLALADLLLLFTFPFAVTQGaaGWLFGtflCKLLGLINRL 138 grass carp
XP_005988231 137 VFMTFIYLTFFLLGVIGNGLAIATLIQYKQsrtiTENYLLHLAMANLLLVLTFPFSAVDTivGWVFGgflCKTIHAIYKI 216 coelacanth
Feature 1                                                                              ######    
P32302       132 NFYCSSLLLACIAVDRYLAIVHAvhAYRHRrlLSIHITCGTIWLVGFLLALPEILFakvsqghhnnslpRCTFSQEnqae 211 human
CAG09055      83 NFLCGSFLLACIAIDRYLAIVHAisSLQHRrqRSVHLTCLSLWLVCFSMSVPNLVFltatds-thasrtSCSFYNYgih- 160 spotted green p...
NP_001026083 155 NFYLHEHAAGLHRVDRYLAIVYAihTYRKAraRSIHLTCTAIWLSSLLLTLPDLIFmevwtd--esnrsICYFPEAgihg 232 chicken
BAM65823     139 NFFCSNLLLGCISVDRYIAIIHAihTFRSRrlVAVHLPCFGVWALCFLLSMPNLFVleiqe---ngnvtTCTYHQShfps 215 African clawed ...
ACZ06879     139 NLMCGSLLLACISVDRYLAIVHAipSVQARrpRTVHLTCGLLWLICLSVTIPNTVFlsvekevsdptrlSCDYHNYgiha 218 grass carp
XP_005988231 217 NFYCSSLLLGCISFDRYLAIVHAveAYKRRktKQVQFICMVIWVLCFLLSLPDIILmevet---ttnrtSCSFAQGits- 292 coelacanth
Feature 1           #  ##                                                       #      #  #      
P32302       212 thaWFTSRFLYHVAGFLLPMLVMGWCYVGVVHRlrqaqrrPQRQKAVRVAILVTSIFFLCWSPYHIVIFLDTLARlkav- 290 human
CAG09055     161 ahnWVLATRALEHAVFFLSLVIMAYCYSTVVVTlvksprgPTQQGAIRLALLITLVFCVCWLPYNIASVLRTVDDlrtvd 240 spotted green p...
NP_001026083 233 nnvWLATRFLYHSVGFFMPLLVMCYCYMAIVRTlcq-sqrLQRQKAVRVAILVTGVFLLCWSPYHIVIFLNTLTKleaf- 310 chicken
BAM65823     216 srwWQTGRFLNHIVGFLVPLMIMGFCYAHIVTAlcr-sprLEKKKAVRLAILITVVFLLCWTPYNVTVFIDTLEQlgl-- 292 African clawed ...
ACZ06879     219 snwLLTSRFLTHLLCFFLPLAIMGYCYTSIIITlcqsqrsLEKQGAIRLALLVTLVFCLCWLPYNITVFMHTLVVlgvm- 297 grass carp
XP_005988231 293 snwLLVMRFLYHVVGFFLPLAIMSYCYAMIIQTlcq-shrVKKQRAIRVAITVTGVFFVCWTPFNICLFVETLIIlkav- 370 coelacanth
Feature 1                   #   #  ##  #                         
P32302       291 -----dntCKLNGSLPVAITMCEFLGLAHCCLNPMLYTFAGvKFRSDL 333 human
CAG09055     241 dlnrgvrnCESNLLLQAALGVTKSLGFSHCCLNPFLYAFVGvRFRNDL 288 spotted green pufferfish
NP_001026083 311 -----akdCLLEDHLDTAIMVTEAIGFTHCCLNPIIYAFIGvKFRNDF 353 chicken
BAM65823     293 -----vqsCKVRKELPFAITVTEFLGSVHCCLNPILYAFVGvKFRNDA 335 African clawed frog
ACZ06879     298 ----peqdCHAHDTLNRALLVTESIGFSHCCLNPILYAFIGvRFRRDL 341 grass carp
XP_005988231 371 -----eknCTLQTQLDNAIIVTEALGFMQSCLNPVMYTFIGvKFRNHL 413 coelacanth

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap