6GEN,6GEN


Conserved Protein Domain Family
TIP49_C

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pfam17856: TIP49_C 
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TIP49 AAA-lid domain
This family consists of the C-terminal region of several eukaryotic and archaeal RuvB-like 1 (Pontin or TIP49a) and RuvB-like 2 (Reptin or TIP49b) proteins. The N-terminal domain contains the pfam00004 domain. In zebrafish, the liebeskummer (lik) mutation, causes development of hyperplastic embryonic hearts. lik encodes Reptin, a component of a DNA-stimulated ATPase complex. Beta-catenin and Pontin, a DNA-stimulated ATPase that is often part of complexes with Reptin, are in the same genetic pathways. The Reptin/Pontin ratio serves to regulate heart growth during development, at least in part via the beta-catenin pathway. TBP-interacting protein 49 (TIP49) was originally identified as a TBP-binding protein, and two related proteins are encoded by individual genes, tip49a and b. Although the function of this gene family has not been elucidated, they are supposed to play a critical role in nuclear events because they interact with various kinds of nuclear factors and have DNA helicase activities.TIP49a has been suggested to act as an autoantigen in some patients with autoimmune diseases.
Statistics
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PSSM-Id: 436097
Aligned: 15 rows
Threshold Bit Score: 70.752
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6GEN_T   383 IIERRATVERLQVESSALDLLATMGTETSLRYALQLLAPCGILAQTSNRKEIVVNDVNEAKLLFLD 448 Saccharomyces cerevisiae S288C
Q8IIU3   393 ILALRAQTEKINITEEGMNYLAKIGIQSSLRFAMLLLEPSRILATLEGNTIIDIKHIEQADELFMD 458 Plasmodium falciparum 3D7
Q8IAT2   438 VLKLRCKFERIKIDSEALDYLSDIGIKCSLRYAIQLLTPAKILSKKKGKKKIDKNIIEIVSSIFFD 503 Plasmodium falciparum 3D7
Q8STP2   365 IIRRRMKEEGLEMDDDAFGFFVGLSTSRSLRYCISLIPLLKTY-----GGCVSVRNVEEVAELFHD 425 Encephalitozoon cuniculi GB-M1
Q8SU27   344 ILRHRILEEDILIDDDAVDRLVSISEASGLRYSMNLLTISSMRASRRNGR-VALGDVERAFELFLD 408 Encephalitozoon cuniculi GB-M1
6GEN_U   367 ILSIRAQEEEVELSSDALDLLTKTGVETSLRYSSNLISVAQQIAMKRKNNTVEVEDVKRAYLLFLD 432 Saccharomyces cerevisiae S288C
Q9M2X5   368 ILEIRCQEEDVEMNEEAKQLLTLIGCNTSLRYAIHLINAAALACLKRKGKVVEIQDIERVYRLFLD 433 thale cress
CAJ83917 369 ILKIRCEEEDVDMTEDAYTVLTRIGLETSLRYSMQLITAASLVCRKRKGTEVQVDDIKRVYSLFLD 434
Q9GZH2   366 ILSIRCDEEGVKLQPTALDLLVKLQEATSLRYCIHLIAASEVIRIRSKAEIVTTDHIGSAYRLFFD 431 Caenorhabditis elegans
Q9YFB5   368 IIRIRADEEEVLLSENALERLADIGSEKSLRYAIQLLEPAMIVAKRRGSRRVEAEHVEEAERLFAD 433 Aeropyrum pernix
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