Conserved Protein Domain Family
RepB

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pfam07506: RepB 
RepB plasmid partitioning protein
This family includes proteins with sequence similarity to the RepB partitioning protein of the large Ti (tumour-inducing) plasmids of Agrobacterium tumefaciens.
Statistics
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PSSM-Id: 311449
Aligned: 15 rows
Threshold Bit Score: 113.338
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q98P91        30 QFCALMVSEGLETMPRLLAHRLPGAPPEPHVFCPPGKPLSDTGenREPIGGIcpgvldvlrdapvkTKIFGLLQKVLPAR 109 Mesorhizobium loti
Q2YJA2       151 ARANLSFIERVFFAARLEAMGFGREAIQAALTVDYQTLSKMLTipKAIPEEI--------------LLAIGPAKGIGRDR 216 Brucella abortu...
Q52226       170 DRADLSFIEKAFFALRLEEAGFDRPTVIAALSTDKADLSRYIAvaKAIPLDL--------------ATQIGPASKAGRSR 235 Plasmid pTiB6S3
Q9F5B9       157 AREDLTFIERAAFALKLDEGGFQRSLIQMALSVDRHEAQKLVTvaRAVPQWL--------------IDSIGRAPKIGRPR 222 Agrobacterium r...
Q88BH5       104 ARRQHRPIDLMNEVGRLKGRGKTDAEIATIIGSTSSWV-------NMIVNLIergeekllsavetgLIPLSMATDIARSS 176 Pseudomonas syr...
Q89W19       107 ARRHHRAIDLLDEINTLRGRGYDEREIARKIGVSPDYV-------RMISTLLskgeerlvhavetgILPLNMAIEIARCD 179 Bradyrhizobium ...
WP_010974304  98 ARRQHSPLELVREIAVLRDRGYSLTEISTKTDFSEEYV-------YAVCYLLdhgeerllagvekgIIPASIAMQISRAK 170 Agrobacterium t...
Q88BH6       113 RTNRLSAVQSNKMIVRAMERGVSAERLGKALGLSPQTIRQR----FRLLNGIcaevvallgdtdcpANVFNLLRQMKPLR 188 Pseudomonas syr...
Q983Y2        77 AFRGLLQSNGFATPPSILMQNSPEARVKAGIGEDRQISLPRVD--EPLVEGIclealdmlndfgapLKIFGLLREVVPGR 154 Mesorhizobium loti
AAK90414     101 RVNRLATVQEHYMLIKALNSGVPEEKLAKTFDLDISMIKRR----RTLLDGIcpeviellkdksvnPVTFDVLRKMRPMR 176
Q98P91       110 QVEIARLM-------VAM--DQVRLTYARMLVALTPQALLVKDFh--pSTIANLTEGHRG--AMVLEVG-KLS---LAVL 172 Mesorhizobium loti
Q2YJA2       217 WLELRKLVempgkkaAAA--ELIETDSFKSASSPDRFEQLYGYLk--gGRQKRPVTKSAS--RPGSIWT-APD---RGLN 286 Brucella abortu...
Q52226       236 WVALAEGLans--kaADAigGVLESELFRTSDSDTRFSLVLKAVlk-pAVKPSKSVKAWS--MPKGKKA-AV-------- 301 Plasmid pTiB6S3
Q9F5B9       223 WLELAELLkvpgaekKAR--KATQDKSFSHKDSDNRF--LVV-Lr--aSKIDDVTASSVAptRLVAKSAdGLQ---IATL 292 Agrobacterium r...
Q88BH5       177 ESDIQDLL----------------TDAYERGIRGKKITKLRHLLelraKKDKLVRGNPLG--VSQNKKK-RLTp--TDLR 235 Pseudomonas syr...
Q89W19       180 DNEVQRAL---------------TQAYTEKKLRGSKLVAVRRVIeqrqRRGKHLHGQSFG--RPPSKRP-LTS---ESMI 238 Bradyrhizobium ...
WP_010974304 171 DAEVQKAL---------------AEAYEQKSIPGNQVLAIRKIVeqrnLSGKTVSG---A--AYRGDSP-RKQvtaAALV 229 Agrobacterium t...
Q88BH6       189 QIEAAELM-------IGN--KNLSVLLAKALLAATPPDQLVMIKk--pSQDHQVSAESMA--RLERELA-ALQ---MQIK 251 Pseudomonas syr...
Q983Y2       155 QVEIVRLM-------LAM--NRVEFRVARLLIELTPRSQLTNPLar-rKRYEGISPAQMA--AMEADIA-EVS---HDYL 218 Mesorhizobium loti
AAK90414     177 QIESAELM-------LTV--HNWTSSYAKALLAATKQEDLAKPDr--pKKIGGLTREQMA--RMEREMA-SLH---QDFK 239
Q98P91       173 GAMEQRG-QVGLELVAASRFfarlmdnsRVVRYLARNYPGHFEEF 216 Mesorhizobium loti
Q2YJA2       287 VVIKQTGkTATLALGAANGH--------RFADWLSRNLDELYASF 323 Brucella abortus 2308
Q52226       302 -IQKDTG-RTALIFDEKLVP--------AFGEFVADQLDRLYAQF 336 Plasmid pTiB6S3
Q9F5B9       293 AIGGKQC-KIEMNRDRDETF----------AKFVMEQLPALYANF 326 Agrobacterium rhizogenes
Q88BH5       236 HLFEREAeRQRLMVKKAAFThdrvvfsiQAIKELLAV-----SDF 275 Pseudomonas syringae pv. tomato
Q89W19       239 RVYRQEAdRQRLLIKKAEVTqnrllfvvEAIRALRED-----TDF 278 Bradyrhizobium japonicum
WP_010974304 230 RAYQKETeRQKMLIKKATLAqsrllflvNALRRLIDD-----EHF 269 Agrobacterium tumefaciens complex
Q88BH6       252 TVEEDYG-PDVLHLTVIKGYltkllanaAVVRWLARHQPEYLKEF 295 Pseudomonas syringae pv. tomato
Q983Y2       219 SAASTHG-SEMLNLIAATSYfdrllnnpKLVRYLARNFARQLEVF 262 Mesorhizobium loti
AAK90414     240 QIEESYG-DDILHLVVASGYlsklvgnsEIERFLTQRYPEFLDEF 283
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