Conserved Protein Domain Family
MD

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smart00604: MD 
MD domain
Statistics
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PSSM-Id: 214741
Aligned: 10 rows
Threshold Bit Score: 98.0187
Created: 12-Jul-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q20219 1325 DDDLPAGWWYAKVKSN--PPSGypnmCTMSVRVQ-SSLQIVTGFS-------TKIGNDFPLPDP---IQDSTENRLISYV 1391 Caenorhabditis elegans
Q19853 1328 DADLPAGDWYVKIKTN--PTNSnppyCSLSVRVQ-SSLQIVSGFA-------TKIGDDNPQIDP---IQDFSSNRLITYV 1394 Caenorhabditis elegans
Q20219  178 YLHLPPGQYMLGPRAD--TSEQf---CTMMMSSR-SSIHVSGGFT-------SGDQAERS-DYPnlkFTYFDTESVVAIH 243  Caenorhabditis elegans
Q21884 1393 SGHNA-GTWSVTVKST--GS------CYLQARVN-SPLQIIPRFT-------NDQGDDFGSGTPr-vGAGSTSASYITFR 1454 Caenorhabditis elegans
Q23409  399 INHLSRGIWKIRVRAN--GQ------CSISIRSQ-STVQVATRFT-------TNIHDDVGKEEP---NKNTDMNRLVIFT 459  Caenorhabditis elegans
Q22774 1173 VNIVPGGLWKVTVQSN---SGS----CEIQARSQ-SDIQVFFGFV-------TDPRNDKPSTYAniqSNSNY---LIAYP 1234 Caenorhabditis elegans
Q23409  881 TGEQP-GVWTIDVDYG--MSNSg--pCTLNIRTQ-SKLEVDLGFT-------QDVASDQGYHDG----------GAVLFP 937  Caenorhabditis elegans
Q19853  181 YETLAPGQYLLGPRAD---SGDe--fCTMMMTAH-TNIQVTGGFT-------SGDQPERS-DYPtlkFAYFDTESAVVLH 246  Caenorhabditis elegans
Q22774   64 YADLPSGGYTLSIDNQgvPTSE----CIIEVNGDpSGLKAVDGFV-------YSPQSDDP-PYG-----ESAINGVPMYM 126  Caenorhabditis elegans
Q22774 1664 GATRA-GTYRILLTGT--GGNN----CFATVRGR-SNLELFLGFVdsssdghNGATNDAT-HYApvnLENNT----IVVH 1730 Caenorhabditis elegans
Q20219 1392 HSV-----DNENRV-PILTDAILWDAYNGT------------FYNGLKYQvrFG-CQFAWVT-----Q-DFPCpnGDsqa 1446 Caenorhabditis elegans
Q19853 1395 HSV-----DNENRV-PIMTDAILWDFYNGT------------FYNGLKYQarFG-CQYGWVS-----Q-DFPCpnSDnqn 1449 Caenorhabditis elegans
Q20219  244 AQGl----DFPGQIqAIGFTGAENHISRYIpmttrfnctypyILER------YT-CRKTSNN-----DaGH--------- 298  Caenorhabditis elegans
Q21884 1455 VMDsy-nsDSHNFGsTILTVSSAN-TDPETpwetgi-ftnatVLVRD--P--VN-CASQFVTplitwTsTY----MK--- 1519 Caenorhabditis elegans
Q23409  460 YGV-----ENKNGA-----EYAHFYYDNFT------------MLQAQSLTyrDN-CMFSFIS-----T-PFSCpnFY--- 507  Caenorhabditis elegans
Q22774 1235 TGVlpytpDTKPSMeGKL-NYAVL-SSNRTitnslplgnracTYATISAP--FS-CPVTDGS-----LsD---------- 1294 Caenorhabditis elegans
Q23409  938 RGG-----DFENAIvADISEGGTLTYAQIFdldetriawaspLIKR------DG-CAYPFIS-----EyTFQC--YRn-- 996  Caenorhabditis elegans
Q19853  247 AQGl----HFPGQIqAIGFTGAENHISRYIpmatrfnctypyILER------YT-CRKIGNN-----DiGH--------- 301  Caenorhabditis elegans
Q22774  127 AAHv----DNSPAQ----VQSITIRQGNSLa----------pVYRA-ALTrrYQ-CGYEYYA-----G-QWQCqlg---- 176  Caenorhabditis elegans
Q22774 1731 ANGl-------GAG---IVRYVQI-VMPRFg-----------LLHTTEMRkrDSaCSYEWYA-----TtPFSF--DYd-- 1779 Caenorhabditis elegans
Q20219 1447 neFGVLHVGEDEFGNTFQRL 1466 Caenorhabditis elegans
Q19853 1450 neFGVLHVGEDEFGNTFQRL 1469 Caenorhabditis elegans
Q20219  299 --NLIQVEGVTNSGYKFRRI 316  Caenorhabditis elegans
Q21884 1520 --FVVR--GKDSNNNDYQRT 1535 Caenorhabditis elegans
Q23409  508 --YQMLITGIDDSGYLYQRI 525  Caenorhabditis elegans
Q22774 1295 --FSIKFTGIDQYGYAFERY 1312 Caenorhabditis elegans
Q23409  997 -qFVVALDGLDFEGHPFRRT 1015 Caenorhabditis elegans
Q19853  302 --NLLQVEGMSDNGYVFRRI 319  Caenorhabditis elegans
Q22774  177 naYFYHIDGVDANGFNFRRT 196  Caenorhabditis elegans
Q22774 1780 -qYYVIIYGSSEFGSNWKRN 1798 Caenorhabditis elegans
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