Conserved Protein Domain Family
YDG

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pfam18657: YDG 
YDG domain
This presumed domain is found in a wide variety of bacterial cell surface proteins. This domain has a highly conserved YDG motif near its N-terminus. This domain is likely related to the pfam17883 domain.
Statistics
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PSSM-Id: 436651
Aligned: 56 rows
Threshold Bit Score: 32.3912
Created: 27-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_014430025           2728 TAK-TLTV---SGLGvASSKVYDGSlsAT---VVGSGSLLsaqAPGsgsSSDgkpySgDTIAL-----TGTatGSYNAAS 2795 Rub...
ERL03957               1536 TPKtVYAS---AKRD-PLTKVYDAK--RA---AGVAGDAAv-tLEG---LID----G-TNEST----------AAYYDKN 1587
WP_008689154           2663 TPK-NVTI---TAPT--VTKVYDGN--TN----IEATATQlhaFTDalgIAT------DSVa------SIT--LTYDDKN 2716 Rho...
EJL81391               3518 NPF-AVSV--------SGTRSYDGT--AN----VAAGVLNigpLVG----------S-ETLGL-----AGT--ATMADKN 3564
EEF62267               1119 TTG-KLTVsalPVAL-SGTRLFDGT--AT---AAAAILSVtnkVGA------------DVVTVg----GGS--ATLASTN 1173
ABM04128               2976 TAK-ALTA----TVA-APSKIYDGN--GT----AAPTLSItagLVG----------A-ETLGV-----NGT--ASFNSKN 3025
goetting:Awo_c11660    1000 TPK-ALTV---SGVSvTTSKEYDGS--ISaavTNAGTLNPsdvIGS------------DAVSLt----STT--ASYDSAV 1055
PRJNA273395:TH63_16720 1632 TPK---ALa--AAST-VSTKVYDGS--------AATGAVTlgtVTG---LIG----N-ETLAIt----PTA--SNYATAN 1683
WP_013272425            647 KEK-GISI---AGGT-AASKKYDGG--AD---AIVTDLIFsglQNG------------ETLELgrdylVGS--PAYDNAN 702  Lac...
EOS78055                635 TRV-PITInldKELK-AESREYDGT--PG---VKMLGIE----FKG---ILP----G-DEGEVe---lKTR--GIVESAN 690 
WP_014430025           2796 VaGA-NTVS-FGGlTL------SGAQAG--DYVLslGSQAA 2826 Rubrivivax gelatinosus
ERL03957               1588 V-GTgKTVTyEVKlDP------ATQALG--NYYI--VDRSY 1617
WP_008689154           2717 V-GTnKTLA-GSNiSI------SDSNGGg-NYNItfADDTA 2748 Rhodopirellula sallentina
EJL81391               3565 V-GAnKTLT-VAGlSL------VDGSGLasNYTF--TGGTQ 3595
EEF62267               1174 A-GP-EAITsFATlTL------GGAAAA--NYTL--TGASG 1202
ABM04128               3026 V-ADaNLVT-VDTtTLtn--gdNGGLAG--NYSLvgGQTVA 3060
goetting:Awo_c11660    1056 V-GTgKTIT-VNy-TL------TNP-----NYTV-----QP 1077
PRJNA273395:TH63_16720 1684 V-GTsKATTi----TYfladgtNGGLAA--NYSM--APISS 1715
WP_013272425            703 V-GTeKTVSgTASlIL---------NEKtkNYNL---ISGN 730  Lacrimispora saccharolytica
EOS78055                691 V-GTyTEVT-LANlEL------TGKKGG--NYKV--DLDGE 719 
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