Conserved Protein Domain Family
RVT_thumb

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pfam06817: RVT_thumb 
Reverse transcriptase thumb domain
This domain is known as the thumb domain. It is composed of a four helix bundle.
Statistics
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PSSM-Id: 429135
Aligned: 15 rows
Threshold Bit Score: 83.9087
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P11283       1100 YQKLQIRTDKLRTLNDFQKLLGNINWIRPFLKLTTGELKPLFEILNGDSNPISIRKLTPEACKALQ 1165 Mouse mammary tumor virus (...
6_pfamImport    1 PQQLSI-KDNPRTLRDLHSLCGSINWIRPLLGITTKDLAPLFNLLHGKEDLDSPCTITPEGQSAIV 65  
AAM81188      244 PLEFEIAIDGLQTLNDFQKLCGNLNWLRPYCKLTTEDMMPLFNILEGDAQLDSPRRLTKEARLALQ 309 
7_pfamImport    1 LQRNIIKPQKKIILNDFQKLSGDINWLQPSLGITSHSLTHIFQVLQGESDLNRPCVLTEQAKQKLD 66  
9_pfamImport    1 PQKVQIRRDNLKTLNDFQKLLGDINWLRPMLGIPTHQLRHLFSTLEGDTALNSPRSLTSQAKEELH 66  
3_pfamImport    1 PQKLQIRRDHLKTLNDFQKLLGDINWLRPVLGIPTYQ----FSTLEGDTALDSPRTLTPLALQELQ 62  
4_pfamImport    1 PQKSQIRRGHLKTLNDFQKLLGDINWLRPVLGIPTYQLQHLFSTLEGDTALDSPRTLIPLALQELQ 66  
P18096        852 LQKLQLPQKDIWTVNDIQKLVGVLNWAAQIY--SGIKTKHLCRLIRGKMTLTEEVQWTELAEAELE 915  Human immunodeficiency viru...
P63133        252 PQKIEIRKDTLKTLNDFQKLLGDINWIQPTLGIPTYAMSNLFSILRGDSDLNSKRILTPEATKEIK 317  human
5_pfamImport    1 PQKVELRRDQISTLNDLQKLLGDINWLRPYLGIPTYELSNLFSLLRGDSKLNSPRSLTAEAEEELK 66  
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