Conserved Protein Domain Family
biofilm_BapA_N

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NF033677: biofilm_BapA_N 
BapA prefix-like domain
Two largely unrelated repetitive proteins, both named biofilm-associated protein BapA (from Salmonella enterica and from Paracoccus denitrificans) share homology domains at the two ends. Both lack a typical signal peptide for translocation by Sec, and instead depend on type I secretion for export and for contribution to biofilm formation. The conserved prefix (i.e. N-terminal) domain is shared by a number of other large, repetitive proteins of Proteobacteria thought to be associated with adhesion or biofilm formation.
Statistics
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PSSM-Id: 411274
Aligned: 50 rows
Threshold Bit Score: 68.3504
Created: 24-Apr-2023
Updated: 3-May-2023
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_004089566   17 VDIVARSNGKQITQYAHAqgnrVVTLTESSVVRIHGDSAMVASYERQGNDLIVHMKDGSTMRYQRFFF 84   Hafnia alvei
WP_007681602   11 VDILNQNTGDVITHYSQNad-rVVNLSQTSIVRINASPETVNFYERQGNDLIVHMKDGTTVRYQHFFL 77   Cronobacter condimenti
WP_002437745   11 VDILNRNTGDLVTQFSGAgd-rVINITQSSVVRINASPETVNFYERQGDDLIVHMRDGSTVRYQKFFQ 77   Atlantibacter hermannii
WP_012773679   11 VNILSRQNGQFIENIPQGt--rNVELLESSTVRIHGTPDMVSRYERVGNDLILHMKDGTTVRYESFFT 76   Pectobacterium carotovorum
WP_012814894    1 MQTLARHGGELITTVQAQgt-rTLILSEPSVVRIQASPDVVMRYERQGDDLILHMQDGSTVVCKNYFV 67   Cronobacter turicensis
WP_016240746    5 IDVISRKTSVKQTLINPGd--vTVVIYEPSVVQVHAQASAVARYVREGNDLLIYMQDGTVIRCNGYFL 70   Escherichia coli
WP_010343455    5 VKVVPHGTDIARAHAVPLpadgVVRLTQASQVVLDVPPDRVAAYAREGDDLLVRMKNGETVRIVHFFD 72   Xanthomonas sacchari
WP_006498877    4 SSVLSNHVDVPVANGSQV----VASPGGPANFLLSAHKEDVANYARSGNDLVVEFKDGRTVRVQAFFE 67   Burkholderia cenocepacia
WP_014631755    4 SSVLSNHTDIPVTSTTTF----VTAPNGPANFLVAAHKDDVANYARSGNDLIVEFKDGHALRLQGFFA 67   Ralstonia solanacearum
WP_013039224    4 HVEIQQRGSKLPEKTAVTdrnaVVSVQPQSVIKVVAPPNSVSSMLREGDDLIIHFADGSTIRLDGYFA 71   Sphingobium indicum
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